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Sample GSM177392 Query DataSets for GSM177392
Status Public on Dec 04, 2007
Title sfActCD4, rep3
Sample type RNA
Source name Tconv cells activated in vitro
Organism Mus musculus
Characteristics Genetic background: BDC2.5/NOD.Foxp3sf
Age: 10 days
Number of mice per chip: 3-6
Tissue: Spleen
Sort: Enrichment with anti-CD4 MACS beads
Culture: Activation in vitro with anti-CD3/-CD28 beads + IL2 (20 U/ml) for 4 days
Post-culture sort: CD4+, CD25 hi (top 45%)
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
Hybridization protocol Per Joslin Diabetes Center microarray core facility.
Scan protocol Per Joslin Diabetes Center microarray core facility.
Description jos3371.CEL
Data processing RMA
Submission date Mar 26, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
Platform ID GPL1261
Series (1)
GSE7460 Contribution of Foxp3 to the Treg signature
Reanalyzed by GSE119085

Data table header descriptions
VALUE RMA-unlogged

Data table
1415670_at 238.6339767
1415671_at 405.0499399
1415672_at 4433.793101
1415673_at 684.9429117
1415674_a_at 499.6269415
1415675_at 376.6096723
1415676_a_at 2558.531438
1415677_at 255.1203818
1415678_at 692.3375925
1415679_at 2242.963242
1415680_at 338.8694767
1415681_at 368.9410679
1415682_at 293.3762112
1415683_at 1909.571048
1415684_at 324.3469022
1415685_at 143.4296321
1415686_at 1254.960009
1415687_a_at 873.3375818
1415688_at 1739.283109
1415689_s_at 294.8976265

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.

Supplementary file Size Download File type/resource
GSM177392.CEL.gz 3.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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