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GEO accession:
Sample GSM180531
Query DataSets for GSM180531
Status
Public on Dec 09, 2008
Title
TregThy, rep3
Sample type
RNA
Source name
Treg cells isolated from the thymus
Organism
Mus musculus
Characteristics
Genetic background: BDC2.5/NOD
Age: 4-6 wks
Number of mice per chip: 3-6
Tissue: Thymus
Sort: (pre-sort depletion of CD8a by MACS) B220-, CD11b-, CD8a-, CD4+, CD25+
Extracted molecule
total RNA
Extraction protocol
RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label
Biotin
Label protocol
BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
Hybridization protocol
Per Joslin Diabetes Center microarray core facility.
Scan protocol
Per Joslin Diabetes Center microarray core facility.
Description
jos3454.CEL
Data processing
RMA
Submission date
Apr 04, 2007
Last update date
Aug 28, 2018
Contact name
CBDM Lab
E-mail(s)
cbdm@hms.harvard.edu
Phone
617-432-7747
Organization name
Harvard Medical School
Department
Microbiology and Immunobiology
Lab
CBDM
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL1261
Series (2)
GSE7460
Contribution of Foxp3 to the Treg signature
GSE7852
Fat Treg cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
RMA-unlogged
Data table
ID_REF
VALUE
1415670_at
176.5602089
1415671_at
334.6883326
1415672_at
3450.902866
1415673_at
293.978856
1415674_a_at
429.4345802
1415675_at
335.6454172
1415676_a_at
2018.224815
1415677_at
182.139943
1415678_at
1150.131304
1415679_at
2980.92967
1415680_at
310.7689974
1415681_at
247.3047559
1415682_at
195.7400921
1415683_at
921.9695872
1415684_at
274.0350304
1415685_at
114.8776614
1415686_at
1220.938599
1415687_a_at
1410.823447
1415688_at
2173.393834
1415689_s_at
467.3875791
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM180531.CEL.gz
4.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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