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GEO accession:
Sample GSM180536
Query DataSets for GSM180536
Status
Public on Dec 09, 2008
Title
TconvThy, rep3
Sample type
RNA
Source name
Tconv cells isolated from the thymus
Organism
Mus musculus
Characteristics
Genetic background: BDC2.5/NOD
Age: 4-6 wks
Number of mice per chip: 3-6
Tissue: Thymus
Sort: (pre-sort depletion of CD8a by MACS) B220-, CD11b-, CD8a-, CD4+, CD25-
Extracted molecule
total RNA
Extraction protocol
RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label
Biotin
Label protocol
BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
Hybridization protocol
Per Joslin Diabetes Center microarray core facility.
Scan protocol
Per Joslin Diabetes Center microarray core facility.
Description
jos3462.CEL
Data processing
RMA
Submission date
Apr 04, 2007
Last update date
Aug 28, 2018
Contact name
CBDM Lab
E-mail(s)
cbdm@hms.harvard.edu
Phone
617-432-7747
Organization name
Harvard Medical School
Department
Microbiology and Immunobiology
Lab
CBDM
Street address
77 Avenue Louis Pasteur
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platform ID
GPL1261
Series (2)
GSE7460
Contribution of Foxp3 to the Treg signature
GSE7852
Fat Treg cells
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
RMA-unlogged
Data table
ID_REF
VALUE
1415670_at
188.0213156
1415671_at
419.2565327
1415672_at
3726.653459
1415673_at
266.4881214
1415674_a_at
345.3289233
1415675_at
227.7999862
1415676_a_at
1768.598852
1415677_at
183.8189559
1415678_at
1271.692301
1415679_at
2720.809983
1415680_at
366.0946783
1415681_at
227.0774789
1415682_at
208.6771147
1415683_at
1075.100054
1415684_at
266.8430783
1415685_at
141.4774182
1415686_at
1553.702866
1415687_a_at
2263.64051
1415688_at
2022.617152
1415689_s_at
476.0753998
Total number of rows:
45101
Table truncated, full table size
1026 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM180536.CEL.gz
4.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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