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Sample GSM183394 Query DataSets for GSM183394
Status Public on May 15, 2008
Title Macrophages IL-4 Dex TGF-beta 3h BC286.2
Sample type RNA
 
Source name Macrophages
Organism Homo sapiens
Characteristics Macrophages differentiated in the presence of IL-4 and dexamethasone for 5 days and then stimulated by TGF-beta for 3h
Extracted molecule total RNA
Extraction protocol RNA was isolated using Qiagen RNeasy Mini Kit, treated with DNase and cleaned up with Qiagen RNeasy Mini Kit
Label Labelling was performed according to standart Affymetrix protocol
Label protocol Labelling was performed according to standart Affymetrix protocol
 
Hybridization protocol Hybridization was performed according to standart Affymetrix protocol
Scan protocol Scan was performed according to standart Affymetrix protocol
Description no additional description
Data processing MAS 5.0 was used for data processing
 
Submission date Apr 20, 2007
Last update date Jul 15, 2019
Contact name Alexei Gratchev
E-mail(s) alexei.gratchev@haut.ma.uni-heidelberg.de
Phone 0621 3833103
Organization name Medical Centre Mannheim, University of Heidelberg
Department Department of Dermatology
Street address
City Mannheim
ZIP/Postal code 68167
Country Germany
 
Platform ID GPL570
Series (1)
GSE7568 Effects of TGF-beta on mature macrophages
Relations
Reanalyzed by GSE49910
Reanalyzed by GSE119087
Reanalyzed by GSE134312

Data table header descriptions
ID_REF
VALUE Value
ABS_CALL Abs_call
DETECTION P-VALUE P-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 173.457 P 0.000258358
AFFX-BioB-M_at 215.598 P 4.42873e-05
AFFX-BioB-3_at 150.397 P 6.02111e-05
AFFX-BioC-5_at 480.639 P 4.42873e-05
AFFX-BioC-3_at 569.457 P 4.42873e-05
AFFX-BioDn-5_at 898.238 P 4.42873e-05
AFFX-BioDn-3_at 2247.79 P 7.00668e-05
AFFX-CreX-5_at 4704.75 P 5.16732e-05
AFFX-CreX-3_at 5263.86 P 4.42873e-05
AFFX-DapX-5_at 1.90687 A 0.382599
AFFX-DapX-M_at 1.43946 A 0.814869
AFFX-DapX-3_at 4.02203 A 0.631562
AFFX-LysX-5_at 0.278792 A 0.949919
AFFX-LysX-M_at 1.66103 A 0.783476
AFFX-LysX-3_at 1.67315 A 0.368438
AFFX-PheX-5_at 1.21932 A 0.760956
AFFX-PheX-M_at 0.595925 A 0.945787
AFFX-PheX-3_at 2.69299 A 0.5
AFFX-ThrX-5_at 0.986641 A 0.937071
AFFX-ThrX-M_at 2.59238 A 0.617401

Total number of rows: 54675

Table truncated, full table size 1636 Kbytes.




Supplementary file Size Download File type/resource
GSM183394.CEL.gz 7.8 Mb (ftp)(http) CEL
GSM183394.CHP.gz 12.9 Mb (ftp)(http) CHP
Processed data provided as supplementary file

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