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Sample GSM18444 Query DataSets for GSM18444
Status Public on Mar 24, 2004
Title PGA_PA-N_148
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 09, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 825.4 P 0.002023
AFFX-BioB-M_at 559.3 P 0.000662
AFFX-BioB-3_at 274.6 A 0.131361
AFFX-BioC-5_at 1412 P 0.00034
AFFX-BioC-3_at 1221.9 P 0.00011
AFFX-BioDn-5_at 1306.5 P 0.000044
AFFX-BioDn-3_at 12084.9 P 0.00011
AFFX-CreX-5_at 15629.2 P 0.000044
AFFX-CreX-3_at 18869.1 P 0.000044
AFFX-DapX-5_at 66.3 A 0.185131
AFFX-DapX-M_at 39.2 A 0.51489
AFFX-DapX-3_at 9.8 A 0.973889
AFFX-LysX-5_at 51.4 A 0.139482
AFFX-LysX-M_at 100.6 A 0.5
AFFX-LysX-3_at 32.5 A 0.300606
AFFX-PheX-5_at 16.6 A 0.659339
AFFX-PheX-M_at 76.4 A 0.574038
AFFX-PheX-3_at 40.1 A 0.737173
AFFX-ThrX-5_at 23.3 A 0.58862
AFFX-ThrX-M_at 44 A 0.574038

Total number of rows: 54675

Table truncated, full table size 1452 Kbytes.




Supplementary file Size Download File type/resource
GSM18444_PA-N_148.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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