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Sample GSM1868025 Query DataSets for GSM1868025
Status Public on Sep 15, 2017
Title Neuroblastoma MYCN/Ret M919T.Tum30499
Sample type RNA
 
Source name MYCN/Ret M919T tumor
Organism Mus musculus
Characteristics strain: 129S2-C57BL6/J mixed background
tissue: Neuroblastoma
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (Brainarray V.16.0.0, ENTREZG)
 
Submission date Sep 03, 2015
Last update date Sep 15, 2017
Contact name Isabelle Janoueix-Lerosey
E-mail(s) janoueix@curie.fr
Phone + 33 1 56 24 66 84
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL16368
Series (1)
GSE72678 Expression data from neuroblastoma of TH-MYCN/KI RetM919T mice

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
100008567_at 3.498102213
100009600_at 2.085327887
100012_at 2.462341564
100017_at 2.205520477
100019_at 8.155539234
100034251_at 7.586950314
100034739_at 2.183724217
100034748_at 2.634539684
100036520_at 2.751103467
100036521_at 9.655494122
100036523_at 2.71831717
100036768_at 2.49819323
100037258_at 7.054045466
100037262_at 1.963455561
100037278_at 6.096285076
100038347_at 6.266021977
100038358_at 2.194672747
100038371_at 3.026642546
100038392_at 2.338944547
100038398_at 2.798166932

Total number of rows: 17502

Table truncated, full table size 363 Kbytes.




Supplementary file Size Download File type/resource
GSM1868025_MM41_ARN0001_s1h1_Moe430p2.CEL.gz 3.3 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table
Processed data are available on Series record

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