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Sample GSM1868027 Query DataSets for GSM1868027
Status Public on Sep 15, 2017
Title Neuroblastoma MYCN/Ret M919T.Tum31105
Sample type RNA
 
Source name MYCN/Ret M919T tumor
Organism Mus musculus
Characteristics strain: 129S2-C57BL6/J mixed background
tissue: Neuroblastoma
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (Brainarray V.16.0.0, ENTREZG)
 
Submission date Sep 03, 2015
Last update date Sep 15, 2017
Contact name Isabelle Janoueix-Lerosey
E-mail(s) janoueix@curie.fr
Phone + 33 1 56 24 66 84
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL16368
Series (1)
GSE72678 Expression data from neuroblastoma of TH-MYCN/KI RetM919T mice

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
100008567_at 4.188434287
100009600_at 2.10190075
100012_at 2.516485545
100017_at 2.612892511
100019_at 8.197919653
100034251_at 9.679010193
100034739_at 2.228364535
100034748_at 5.170595663
100036520_at 2.860133082
100036521_at 9.689119342
100036523_at 2.833938431
100036768_at 2.504648601
100037258_at 7.401037297
100037262_at 1.989162279
100037278_at 6.781539934
100038347_at 4.138406627
100038358_at 2.217963972
100038371_at 3.004787809
100038392_at 2.375776426
100038398_at 12.28734907

Total number of rows: 17502

Table truncated, full table size 363 Kbytes.




Supplementary file Size Download File type/resource
GSM1868027_MM41_ARN0003_s1h1_Moe430p2.CEL.gz 3.4 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table
Processed data are available on Series record

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