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Sample GSM1868028 Query DataSets for GSM1868028
Status Public on Sep 15, 2017
Title Neuroblastoma MYCN/Ret M919T.Tum31577
Sample type RNA
 
Source name MYCN/Ret M919T tumor
Organism Mus musculus
Characteristics strain: 129S2-C57BL6/J mixed background
tissue: Neuroblastoma
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (Brainarray V.16.0.0, ENTREZG)
 
Submission date Sep 03, 2015
Last update date Sep 15, 2017
Contact name Isabelle Janoueix-Lerosey
E-mail(s) janoueix@curie.fr
Phone + 33 1 56 24 66 84
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL16368
Series (1)
GSE72678 Expression data from neuroblastoma of TH-MYCN/KI RetM919T mice

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
100008567_at 3.946227249
100009600_at 2.074831397
100012_at 2.439305448
100017_at 2.28728766
100019_at 8.741148099
100034251_at 9.774118323
100034739_at 2.173801417
100034748_at 2.786077877
100036520_at 2.720643917
100036521_at 9.17967657
100036523_at 2.630285366
100036768_at 2.464943525
100037258_at 7.258902418
100037262_at 1.953313878
100037278_at 6.084607218
100038347_at 6.107579507
100038358_at 2.182132484
100038371_at 3.008033294
100038392_at 2.312857962
100038398_at 12.4470403

Total number of rows: 17502

Table truncated, full table size 363 Kbytes.




Supplementary file Size Download File type/resource
GSM1868028_MM41_ARN0004_s1h1_Moe430p2.CEL.gz 3.3 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table
Processed data are available on Series record

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