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Sample GSM1868029 Query DataSets for GSM1868029
Status Public on Sep 15, 2017
Title Neuroblastoma MYCN/Ret M919T.Tum32288
Sample type RNA
 
Source name MYCN/Ret M919T tumor
Organism Mus musculus
Characteristics strain: 129S2-C57BL6/J mixed background
tissue: Neuroblastoma
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (Brainarray V.16.0.0, ENTREZG)
 
Submission date Sep 03, 2015
Last update date Sep 15, 2017
Contact name Isabelle Janoueix-Lerosey
E-mail(s) janoueix@curie.fr
Phone + 33 1 56 24 66 84
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL16368
Series (1)
GSE72678 Expression data from neuroblastoma of TH-MYCN/KI RetM919T mice

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
100008567_at 2.634058988
100009600_at 2.129932653
100012_at 2.522384214
100017_at 2.215104955
100019_at 8.75967275
100034251_at 9.734262252
100034739_at 2.216107453
100034748_at 4.437585548
100036520_at 2.913881174
100036521_at 9.919960245
100036523_at 2.847852539
100036768_at 2.534674657
100037258_at 7.357889683
100037262_at 2.03388473
100037278_at 6.652874437
100038347_at 4.428843627
100038358_at 2.206038549
100038371_at 3.099405442
100038392_at 2.434497059
100038398_at 6.981945094

Total number of rows: 17502

Table truncated, full table size 363 Kbytes.




Supplementary file Size Download File type/resource
GSM1868029_MM41_ARN0005_s1h1_Moe430p2.CEL.gz 3.2 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table
Processed data are available on Series record

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