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Sample GSM1868030 Query DataSets for GSM1868030
Status Public on Sep 15, 2017
Title Neuroblastoma MYCN/Ret M919T.Tum32297
Sample type RNA
 
Source name MYCN/Ret M919T tumor
Organism Mus musculus
Characteristics strain: 129S2-C57BL6/J mixed background
tissue: Neuroblastoma
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning was performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (Brainarray V.16.0.0, ENTREZG)
 
Submission date Sep 03, 2015
Last update date Sep 15, 2017
Contact name Isabelle Janoueix-Lerosey
E-mail(s) janoueix@curie.fr
Phone + 33 1 56 24 66 84
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL16368
Series (1)
GSE72678 Expression data from neuroblastoma of TH-MYCN/KI RetM919T mice

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
100008567_at 3.694427254
100009600_at 2.096371706
100012_at 2.539365943
100017_at 3.360162875
100019_at 7.940221225
100034251_at 11.1722467
100034739_at 2.233244257
100034748_at 5.397481565
100036520_at 2.88597087
100036521_at 9.0180105
100036523_at 4.409103974
100036768_at 2.489178984
100037258_at 7.451820985
100037262_at 2.027863562
100037278_at 6.297305323
100038347_at 3.388907995
100038358_at 2.232405575
100038371_at 3.08690926
100038392_at 2.422956853
100038398_at 9.44860394

Total number of rows: 17502

Table truncated, full table size 363 Kbytes.




Supplementary file Size Download File type/resource
GSM1868030_MM41_ARN0006_s1h1_Moe430p2_2.CEL.gz 3.1 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table
Processed data are available on Series record

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