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Sample GSM187259 Query DataSets for GSM187259
Status Public on May 04, 2007
Title Chow diet (21B8)
Sample type RNA
Source name livers from C57BL/6 animals
Organism Mus musculus
Characteristics Animals on Chow Diet
Treatment protocol Animals on Chow Diet
Extracted molecule total RNA
Extraction protocol RNA Midi Kit from Qiagen
Label biotin
Label protocol one cycle (Affymetrix standard protocol)
Hybridization protocol Standard Affymetrix
Scan protocol Standard Affymetrix
Description heptic gene expression profile of mouse on chow diet.
Data processing GCOS, MAS5
Submission date May 03, 2007
Last update date May 03, 2007
Contact name Manoj Bhasin
Phone 6176670009
Organization name Beth Israel Deaconess Medical Center
Street address 330 Brookline Avenue RN 380E
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
Platform ID GPL1261
Series (1)
GSE7699 A high fat, ketogenic diet induces a unique metabolic state in mice.

Data table header descriptions
VALUE signal count data for human blood monocyte (MAS5-algorithm)
ABS_CALL detection
DETECTION P-VALUE detection p-value

Data table
AFFX-BioB-5_at 75.2 P 0.000754
AFFX-BioB-M_at 166.6 P 0.000225
AFFX-BioB-3_at 100.3 P 0.000044
AFFX-BioC-5_at 329.3 P 0.000052
AFFX-BioC-3_at 389.1 P 0.000044
AFFX-BioDn-5_at 794.7 P 0.000044
AFFX-BioDn-3_at 1385.3 P 0.000044
AFFX-CreX-5_at 2895 P 0.000052
AFFX-CreX-3_at 3795.8 P 0.000044
AFFX-DapX-5_at 1.4 A 0.440646
AFFX-DapX-M_at 3.6 A 0.48511
AFFX-DapX-3_at 4.6 A 0.574038
AFFX-LysX-5_at 4.3 A 0.185131
AFFX-LysX-M_at 5.8 A 0.659339
AFFX-LysX-3_at 7 P 0.020022
AFFX-PheX-5_at 0.3 A 0.963431
AFFX-PheX-M_at 0.5 A 0.979978
AFFX-PheX-3_at 3.7 A 0.48511
AFFX-ThrX-5_at 4.7 A 0.48511
AFFX-ThrX-M_at 2.3 A 0.603089

Total number of rows: 45101

Table truncated, full table size 1177 Kbytes.

Supplementary data files not provided
Raw data not provided for this record

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