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GEO accession:
Sample GSM187259
Query DataSets for GSM187259
Status
Public on May 04, 2007
Title
Chow diet (21B8)
Sample type
RNA
Source name
livers from C57BL/6 animals
Organism
Mus musculus
Characteristics
Animals on Chow Diet
Treatment protocol
Animals on Chow Diet
Extracted molecule
total RNA
Extraction protocol
RNA Midi Kit from Qiagen
Label
biotin
Label protocol
one cycle (Affymetrix standard protocol)
Hybridization protocol
Standard Affymetrix
Scan protocol
Standard Affymetrix
Description
heptic gene expression profile of mouse on chow diet.
Data processing
GCOS, MAS5
Submission date
May 03, 2007
Last update date
May 03, 2007
Contact name
Manoj Bhasin
Phone
6176670009
Organization name
Beth Israel Deaconess Medical Center
Street address
330 Brookline Avenue RN 380E
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL1261
Series (1)
GSE7699
A high fat, ketogenic diet induces a unique metabolic state in mice.
Data table header descriptions
ID_REF
VALUE
signal count data for human blood monocyte (MAS5-algorithm)
ABS_CALL
detection
DETECTION P-VALUE
detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
75.2
P
0.000754
AFFX-BioB-M_at
166.6
P
0.000225
AFFX-BioB-3_at
100.3
P
0.000044
AFFX-BioC-5_at
329.3
P
0.000052
AFFX-BioC-3_at
389.1
P
0.000044
AFFX-BioDn-5_at
794.7
P
0.000044
AFFX-BioDn-3_at
1385.3
P
0.000044
AFFX-CreX-5_at
2895
P
0.000052
AFFX-CreX-3_at
3795.8
P
0.000044
AFFX-DapX-5_at
1.4
A
0.440646
AFFX-DapX-M_at
3.6
A
0.48511
AFFX-DapX-3_at
4.6
A
0.574038
AFFX-LysX-5_at
4.3
A
0.185131
AFFX-LysX-M_at
5.8
A
0.659339
AFFX-LysX-3_at
7
P
0.020022
AFFX-PheX-5_at
0.3
A
0.963431
AFFX-PheX-M_at
0.5
A
0.979978
AFFX-PheX-3_at
3.7
A
0.48511
AFFX-ThrX-5_at
4.7
A
0.48511
AFFX-ThrX-M_at
2.3
A
0.603089
Total number of rows:
45101
Table truncated, full table size
1177 Kbytes
.
Supplementary data files not provided
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