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Sample GSM187260 Query DataSets for GSM187260
Status Public on May 04, 2007
Title Chow diet (21B9)
Sample type RNA
Source name livers from C57BL/6 animals
Organism Mus musculus
Characteristics Hepatic gene expression data of C57BL/6 animals on chow diet
Treatment protocol chow diet
Extracted molecule total RNA
Extraction protocol RNA Midi Kit from Qiagen
Label biotin
Label protocol one cycle (Affymetrix standard protocol)
Hybridization protocol Standard Affymetrix
Scan protocol Standard Affymetrix
Description Hepatic gene expression data of C57BL/6 animals on chow diet
Data processing GCOS,MAS5
Submission date May 03, 2007
Last update date May 03, 2007
Contact name Manoj Bhasin
Phone 6176670009
Organization name Beth Israel Deaconess Medical Center
Street address 330 Brookline Avenue RN 380E
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
Platform ID GPL1261
Series (1)
GSE7699 A high fat, ketogenic diet induces a unique metabolic state in mice.

Data table header descriptions
VALUE signal count data for human blood monocyte (MAS5-algorithm)
ABS_CALL detection
DETECTION P-VALUE detection P-value

Data table
AFFX-BioB-5_at 101.3 P 0.000857
AFFX-BioB-M_at 160.9 P 0.00011
AFFX-BioB-3_at 98.2 P 0.000044
AFFX-BioC-5_at 368 P 0.000052
AFFX-BioC-3_at 398.7 P 0.000044
AFFX-BioDn-5_at 754.5 P 0.000044
AFFX-BioDn-3_at 1611.1 P 0.000044
AFFX-CreX-5_at 3210.6 P 0.000044
AFFX-CreX-3_at 3682 P 0.000044
AFFX-DapX-5_at 4.4 A 0.58862
AFFX-DapX-M_at 8.8 A 0.262754
AFFX-DapX-3_at 0.9 A 0.984825
AFFX-LysX-5_at 0.6 A 0.686292
AFFX-LysX-M_at 9.9 A 0.425962
AFFX-LysX-3_at 1.9 A 0.559359
AFFX-PheX-5_at 0.4 A 0.978098
AFFX-PheX-M_at 0.5 A 0.941556
AFFX-PheX-3_at 2.9 A 0.440646
AFFX-ThrX-5_at 1.9 A 0.737173
AFFX-ThrX-M_at 4.2 A 0.559354

Total number of rows: 45101

Table truncated, full table size 1174 Kbytes.

Supplementary data files not provided
Raw data not provided for this record

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