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Sample GSM187261 Query DataSets for GSM187261
Status Public on May 04, 2007
Title Chow diet (21C1)
Sample type RNA
Source name livers from C57BL/6 animals
Organism Mus musculus
Characteristics Hepatic gene expression data of C57BL/6 animals on chow diet
Extracted molecule total RNA
Extraction protocol Extraction protocol RNA Midi Kit from Qiagen
Label Label biotin
Label protocol Label protocol one cycle (Affymetrix standard protocol)
Hybridization protocol Hybridization protocol Standard Affymetrix

Scan protocol Scan protocol Standard Affymetrix
Description Hepatic gene expression data of C57BL/6 animals on chow diet
Data processing Data processing GCOS,MAS5
Submission date May 03, 2007
Last update date May 03, 2007
Contact name Manoj Bhasin
Phone 6176670009
Organization name Beth Israel Deaconess Medical Center
Street address 330 Brookline Avenue RN 380E
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
Platform ID GPL1261
Series (1)
GSE7699 A high fat, ketogenic diet induces a unique metabolic state in mice.

Data table header descriptions
VALUE signal count data for human blood monocyte (MAS5-algorithm)
ABS_CALL detection
DETECTION P-VALUE detection P-value

Data table
AFFX-BioB-5_at 85.1 P 0.000754
AFFX-BioB-M_at 182.6 P 0.000127
AFFX-BioB-3_at 91.8 P 0.000052
AFFX-BioC-5_at 326.2 P 0.000052
AFFX-BioC-3_at 375.6 P 0.000044
AFFX-BioDn-5_at 720.8 P 0.000044
AFFX-BioDn-3_at 1411.6 P 0.000044
AFFX-CreX-5_at 2957.4 P 0.000052
AFFX-CreX-3_at 3747.7 P 0.000044
AFFX-DapX-5_at 1 A 0.425962
AFFX-DapX-M_at 6 A 0.470241
AFFX-DapX-3_at 1.1 A 0.883887
AFFX-LysX-5_at 0.8 A 0.712274
AFFX-LysX-M_at 14.9 A 0.275146
AFFX-LysX-3_at 2.3 A 0.39692
AFFX-PheX-5_at 0.2 A 0.960339
AFFX-PheX-M_at 0.4 A 0.963431
AFFX-PheX-3_at 2.6 A 0.737173
AFFX-ThrX-5_at 1.2 A 0.843353
AFFX-ThrX-M_at 7.8 A 0.313723

Total number of rows: 45101

Table truncated, full table size 1173 Kbytes.

Supplementary data files not provided
Raw data not provided for this record

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