GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM187262 Query DataSets for GSM187262
Status Public on May 04, 2007
Title Ketogenic diet (21C8)
Sample type RNA
Source name livers from C57BL/6 animals
Organism Mus musculus
Characteristics Hepatic gene expression data of C57BL/6 animals on Ketogenic diet
Treatment protocol

Extracted molecule total RNA
Extraction protocol Extraction protocol RNA Midi Kit from Qiagen
Label Label biotin
Label protocol Label protocol one cycle (Affymetrix standard protocol)
Hybridization protocol Hybridization protocol Standard Affymetrix

Scan protocol Scan protocol Standard Affymetrix
Description Hepatic gene expression data of C57BL/6 animals on Ketogenic diet
Data processing Data processing GCOS,MAS5
Submission date May 03, 2007
Last update date May 03, 2007
Contact name Manoj Bhasin
Phone 6176670009
Organization name Beth Israel Deaconess Medical Center
Street address 330 Brookline Avenue RN 380E
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
Platform ID GPL1261
Series (1)
GSE7699 A high fat, ketogenic diet induces a unique metabolic state in mice.

Data table header descriptions
VALUE signal count data for human blood monocyte (MAS5-algorithm)
ABS_CALL detection
DETECTION P-VALUE detection P-value

Data table
AFFX-BioB-5_at 69.3 P 0.000662
AFFX-BioB-M_at 129.9 P 0.00034
AFFX-BioB-3_at 77.7 P 0.000044
AFFX-BioC-5_at 255.7 P 0.00006
AFFX-BioC-3_at 293 P 0.000044
AFFX-BioDn-5_at 561.6 P 0.000044
AFFX-BioDn-3_at 1096.4 P 0.000044
AFFX-CreX-5_at 2565.7 P 0.000044
AFFX-CreX-3_at 3132.3 P 0.000044
AFFX-DapX-5_at 1 A 0.617401
AFFX-DapX-M_at 6.7 A 0.300606
AFFX-DapX-3_at 1.3 A 0.794268
AFFX-LysX-5_at 3.3 A 0.108979
AFFX-LysX-M_at 1.6 A 0.852061
AFFX-LysX-3_at 1 A 0.574038
AFFX-PheX-5_at 0.9 A 0.834139
AFFX-PheX-M_at 0.6 A 0.953518
AFFX-PheX-3_at 7.5 A 0.39692
AFFX-ThrX-5_at 1.4 A 0.686277
AFFX-ThrX-M_at 9.6 A 0.39692

Total number of rows: 45101

Table truncated, full table size 1177 Kbytes.

Supplementary data files not provided
Raw data not provided for this record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap