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GEO accession:
Sample GSM188564
Query DataSets for GSM188564
Status
Public on Dec 25, 2007
Title
Knockout aortic banded, biological rep1
Sample type
RNA
Source name
Heart
Organism
Mus musculus
Characteristics
Genotype: KO
Treatment protocol
Aortic banded vs sham
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Affmetrix standard protocol
Hybridization protocol
Affymetrix strandard protocol
Scan protocol
GeneChip Operating Software (GCOS) 1.4 was used for scanning
Description
Gene Expression data from KO AB
Data processing
Data was analysed using GeneSpring 7.0, Agilent
Submission date
May 11, 2007
Last update date
Aug 28, 2018
Contact name
Sara Arab
Organization name
Toronto General Hospital
Department
Cardiology
Lab
M. Husain
Street address
610 University Avenue
City
Toronto
State/province
ONT
ZIP/Postal code
M5G 2M9
Country
Canada
Platform ID
GPL1261
Series (1)
GSE7781
Impaired heart function in Apelin gene-deficient mice
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
385.684
P
0.000581214
AFFX-BioB-M_at
560.745
P
4.42873e-05
AFFX-BioB-3_at
306.557
P
4.42873e-05
AFFX-BioC-5_at
763.298
P
7.00668e-05
AFFX-BioC-3_at
784.578
P
4.42873e-05
AFFX-BioDn-5_at
1054.75
P
4.42873e-05
AFFX-BioDn-3_at
3289.56
P
8.14279e-05
AFFX-CreX-5_at
8781.72
P
5.16732e-05
AFFX-CreX-3_at
7516.57
P
4.42873e-05
AFFX-DapX-5_at
6.87
A
0.195266
AFFX-DapX-M_at
6.61433
A
0.455413
AFFX-DapX-3_at
9.30416
A
0.645547
AFFX-LysX-5_at
1.44015
A
0.5
AFFX-LysX-M_at
2.4127
A
0.686277
AFFX-LysX-3_at
1.50104
A
0.52976
AFFX-PheX-5_at
1.14822
A
0.876428
AFFX-PheX-M_at
0.64939
A
0.937071
AFFX-PheX-3_at
4.2618
A
0.631562
AFFX-ThrX-5_at
3.82205
A
0.749204
AFFX-ThrX-M_at
9.40295
A
0.275146
Total number of rows:
45101
Table truncated, full table size
1376 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM188564.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
GSM188564.CHP.gz
243.3 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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