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Sample GSM19252 Query DataSets for GSM19252
Status Public on Mar 28, 2004
Title Mouse Testis 1 (technical replicate)
Sample type RNA
 
Source name Mouse Testis
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) rozowsky@csb.yale.edu
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 270.6 P 0.042962
AFFX-BioB-M_at 325.5 P 0.001410
AFFX-BioB-3_at 154.6 M 0.062929
AFFX-BioC-5_at 635.2 P 0.000195
AFFX-BioC-3_at 325.9 P 0.000754
AFFX-BioDn-5_at 405.5 P 0.002023
AFFX-BioDn-3_at 2982.5 P 0.000972
AFFX-CreX-5_at 4425.4 P 0.000052
AFFX-CreX-3_at 6786.7 P 0.000044
AFFX-DapX-5_at 30.2 A 0.262827
AFFX-DapX-M_at 45.7 A 0.156732
AFFX-DapX-3_at 18.4 A 0.834139
AFFX-LysX-5_at 21.8 A 0.737173
AFFX-LysX-M_at 56.3 A 0.645547
AFFX-LysX-3_at 7.2 A 0.470241
AFFX-PheX-5_at 9.6 A 0.804734
AFFX-PheX-M_at 79.2 A 0.514890
AFFX-PheX-3_at 26.3 A 0.699394
AFFX-ThrX-5_at 10.8 A 0.834139
AFFX-ThrX-M_at 50.6 A 0.411380

Total number of rows: 22690

Table truncated, full table size 629 Kbytes.




Supplementary data files not provided

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