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Sample GSM19253 Query DataSets for GSM19253
Status Public on Mar 28, 2004
Title Mouse Testis 2
Sample type RNA
 
Source name Mouse Testis
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) rozowsky@csb.yale.edu
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 271.9 P 0.004017
AFFX-BioB-M_at 446.2 P 0.000127
AFFX-BioB-3_at 236.7 P 0.000754
AFFX-BioC-5_at 705.4 P 0.000110
AFFX-BioC-3_at 486.0 P 0.000044
AFFX-BioDn-5_at 676.3 P 0.000147
AFFX-BioDn-3_at 3156.8 P 0.000258
AFFX-CreX-5_at 7173.8 P 0.000044
AFFX-CreX-3_at 10577.7 P 0.000044
AFFX-DapX-5_at 23.8 A 0.195266
AFFX-DapX-M_at 7.9 A 0.631562
AFFX-DapX-3_at 3.3 A 0.986189
AFFX-LysX-5_at 6.2 A 0.485110
AFFX-LysX-M_at 3.7 A 0.883887
AFFX-LysX-3_at 10.6 A 0.368438
AFFX-PheX-5_at 4.1 A 0.897835
AFFX-PheX-M_at 13.8 A 0.631562
AFFX-PheX-3_at 14.0 A 0.529760
AFFX-ThrX-5_at 8.1 A 0.916408
AFFX-ThrX-M_at 21.4 A 0.440646

Total number of rows: 22690

Table truncated, full table size 628 Kbytes.




Supplementary data files not provided

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