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Sample GSM19257 Query DataSets for GSM19257
Status Public on Mar 28, 2004
Title Mouse Ovary 1
Sample type RNA
 
Source name Mouse Ovary
Organism Mus musculus
Extracted molecule total RNA
 
Description Triple selected polyA RNA for liver, kidney, ovary,
testis, was obtained from Ambion (Austin, TX). Total
RNA was obtained form Ambion for hypothalamus samples.
All RNA samples had an agilent ratio greater
than 1 indicating that degradation had not occurred.
All RNA samples were prepared from a pool of 10
different animals. The total RNA samples were
labeled for hybridization onto the microarray according
to affymetrix protocols listed at:
http://keck.med.yale.edu/affymetrix/protocols
Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
 
Submission date Mar 26, 2004
Last update date May 27, 2005
Contact name Joel Rozowsky
E-mail(s) rozowsky@csb.yale.edu
Phone 203-432-5405
Organization name Yale University
Department Molecular Biophysics & Biochemistry
Lab Gerstein Lab
Street address 266 Whitney Ave, Bass 437
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platform ID GPL339
Series (1)
GSE1148 Sex Specific Transciption in Mouse Tissues

Data table header descriptions
ID_REF
VALUE MAS 5.0 Intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 146.6 P 0.016670
AFFX-BioB-M_at 202.7 P 0.002275
AFFX-BioB-3_at 130.1 P 0.009337
AFFX-BioC-5_at 365.7 P 0.000169
AFFX-BioC-3_at 255.7 P 0.000340
AFFX-BioDn-5_at 244.8 P 0.000147
AFFX-BioDn-3_at 1753.6 P 0.000297
AFFX-CreX-5_at 2496.0 P 0.000044
AFFX-CreX-3_at 5280.3 P 0.000044
AFFX-DapX-5_at 3.3 A 0.396920
AFFX-DapX-M_at 36.2 A 0.102165
AFFX-DapX-3_at 4.6 A 0.945787
AFFX-LysX-5_at 4.4 A 0.659339
AFFX-LysX-M_at 12.7 A 0.617401
AFFX-LysX-3_at 18.5 A 0.156732
AFFX-PheX-5_at 1.9 A 0.966323
AFFX-PheX-M_at 2.3 A 0.927300
AFFX-PheX-3_at 32.2 A 0.411380
AFFX-ThrX-5_at 5.6 A 0.937071
AFFX-ThrX-M_at 19.7 A 0.262827

Total number of rows: 22690

Table truncated, full table size 630 Kbytes.




Supplementary data files not provided

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