NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1940926 Query DataSets for GSM1940926
Status Public on Jul 22, 2016
Title P#232_Normal
Sample type RNA
 
Source name BAL cells, Normal
Organism Homo sapiens
Characteristics individual: Normal Control Subject
cell type: BAL cells
Treatment protocol BAL cells were isolated from BAL fluid by centrifugation at 1,000 g for 10 minutes at 4°C. BAL cells were washed with hanks balanced salt solution, resuspended and counted with a hemocytometer. Mean viability of lavage cells was > 95% as determined by trypan blue dye exclusion.
Growth protocol None
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit (Qiagen, Valencia, CA)
Label Biotin
Label protocol Affymetrix standard protocol
 
Hybridization protocol Affymetrix standard protocol
Scan protocol GeneChip Operating System (GCOS)
Data processing RMA algorithm with quantile normalization and background correction
 
Submission date Nov 16, 2015
Last update date Oct 19, 2022
Contact name Sina Gharib
E-mail(s) sagharib@uw.edu
Organization name University of Washington
Department Medicine
Street address 850 Republican St.
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL571
Series (1)
GSE75023 Transcriptional profle of bronchoalveolar cells in sarcoidosis

Data table header descriptions
ID_REF
VALUE Natural scale RMA signal

Data table
ID_REF VALUE
1007_s_at 332.029483
1053_at 960.427345
117_at 572.761515
121_at 738.0335
1255_g_at 17.580928
1294_at 739.000654
1316_at 88.76459
1320_at 58.571487
1405_i_at 281.608075
1431_at 26.117996
1438_at 88.508134
1487_at 600.440963
1494_f_at 87.069889
1598_g_at 345.806562
160020_at 265.797755
1729_at 1312.505142
177_at 192.183179
1773_at 186.462073
179_at 892.242106
1861_at 206.263126

Total number of rows: 22277

Table truncated, full table size 471 Kbytes.




Supplementary file Size Download File type/resource
GSM1940926_P_232_Normal.CEL.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap