NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1944882 Query DataSets for GSM1944882
Status Public on Mar 16, 2016
Title PC3_PGC1A__M_DOX_3
Sample type RNA
 
Source name PC3 cell line
Organism Homo sapiens
Characteristics cell line: PC3
Extracted molecule total RNA
Extraction protocol NucleoSpin® RNA isolation kit (Macherey-Nagel)
Label Cy3
Label protocol TargetAmp™ Nano-g™ Biotin-aRNA Labeling Kit for the Illumina® System (Epicentre)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description cells without doxycycline
Data processing The data were normalised using quantile normalisation with lumi package in R
 
Submission date Nov 19, 2015
Last update date Mar 16, 2016
Contact name Verónica Torrano Moya
E-mail(s) vtorrano@cicbiogune.es
Organization name CICbioGUNE
Street address 801 Building. Technology Park of Vizcaya
City Derio
ZIP/Postal code 48160
Country Spain
 
Platform ID GPL10558
Series (1)
GSE75193 A metabolic co-regulator bioinformatics screen reveals that PGC1α suppresses prostate cancer metastasis

Data table header descriptions
ID_REF
VALUE log2 transformed and quantile normalized (p value 0.01 or less)
Detection_Pval

Data table
ID_REF VALUE Detection_Pval
ILMN_1755321 6.682675155 0.001298701
ILMN_1698554 7.680810922 0
ILMN_2061446 6.828575189 0.001298701
ILMN_1676336 9.397641538 0
ILMN_2270015 6.583359617 0.001298701
ILMN_1726986 8.88381918 0
ILMN_3237396 7.822534702 0
ILMN_1688755 8.05956891 0
ILMN_1653165 8.515585664 0
ILMN_1662364 11.91785886 0
ILMN_1674698 8.433716924 0
ILMN_1700461 8.39180099 0
ILMN_1784269 6.816931184 0.001298701
ILMN_1698189 9.138373534 0
ILMN_2096191 6.909182053 0.001298701
ILMN_1678323 6.348067515 0.003896104
ILMN_1703743 9.106358227 0
ILMN_1687609 6.017178484 0.1441558
ILMN_1699334 6.748587941 0.001298701
ILMN_1766054 7.972140913 0

Total number of rows: 17925

Table truncated, full table size 544 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap