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Sample GSM198027 Query DataSets for GSM198027
Status Public on Jun 13, 2007
Title Sample 11105, Slide 32011_B
Sample type RNA
 
Source name Whole Blood
Organism Canis rufus
Characteristics Sample 11105, Slide 32011_B, Male, Free Range
Extracted molecule total RNA
Extraction protocol Whole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction KitWhole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction Kit
Label Biotin
Label protocol Total RNA was biotin labeled using Ambion's Illumina RNA Amplification Kit
 
Hybridization protocol Arrays were hybridized overnight following Illumina's Ref-8 hybridization protocol
Scan protocol Arrays were scanned using Illumina's Beadstation Scanner on the Default settings
Description Whole blood was collected in EDTA tubes and immediately mixed and stored in RNAlater.
All protocols were followed according to manufacturer's instructions
Data processing Raw values were extracted from Array image using Illumina's BeadStudio Software version 1.5.0.34. Normalized VALUEs represent median standardized log base 2 signal intensities.
 
Submission date Jun 05, 2007
Last update date Mar 08, 2012
Contact name Erin Kennerly
E-mail(s) emkenner@unity.ncsu.edu
Phone (919) 513-3090
Organization name NCSU
Street address
City Raleigh
State/province NC
ZIP/Postal code 27695
Country USA
 
Platform ID GPL2700
Series (1)
GSE8020 A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)

Data table header descriptions
ID_REF
RAW Raw signal intensities
VALUE median standardized log base 2 signal intensities

Data table
ID_REF RAW VALUE
GI_10047089-S 227.7 0.03235278
GI_10047091-S 528.8 1.24794067
GI_10047093-S 260.2 0.22483945
GI_10047099-S 197.8 -0.1707391
GI_10047103-S 180.3 -0.3043821
GI_10047105-S 227.5 0.03108503
GI_10047121-S 189.5 -0.2325837
GI_10047123-S 417.6 0.9073402
GI_10047133-A 179 -0.3148219
GI_10047133-I 225.4 0.017706
GI_10092578-S 285.3 0.35769824
GI_10092585-S 213.2 -0.0625741
GI_10092596-S 196.2 -0.1824565
GI_10092600-S 185.6 -0.2625848
GI_10092602-S 201.8 -0.1418553
GI_10092603-S 330.4 0.56943218
GI_10092611-A 160.6 -0.4713096
GI_10092616-S 202 -0.1404262
GI_10092618-S 184.9 -0.2680363
GI_10092638-S 213.3 -0.0618975

Total number of rows: 24354

Table truncated, full table size 726 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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