NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM198054 Query DataSets for GSM198054
Status Public on Jun 13, 2007
Title Sample 11275, Slide 32020_A
Sample type RNA
 
Source name Whole
Organism Canis rufus
Characteristics Sample 11275, Slide 32020_A, Female, Captive
Extracted molecule total RNA
Extraction protocol Whole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction KitWhole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction Kit
Label Biotin
Label protocol Total RNA was biotin labeled using Ambion's Illumina RNA Amplification Kit
 
Hybridization protocol Arrays were hybridized overnight following Illumina's Ref-8 hybridization protocol
Scan protocol Arrays were scanned using Illumina's Beadstation Scanner on the Default settings
Description Whole Blood was collected in EDTA tubes and immediately mixed and stored in RNAlater.
All protocols were followed according to manufacturer's instructions
Data processing Raw Values were extracted from Array image files using Illumina's BeadStudio Software version 1.5.0.34. Normalized VALUEs represent median standardized log base 2 signal intensities.
 
Submission date Jun 05, 2007
Last update date Mar 08, 2012
Contact name Erin Kennerly
E-mail(s) emkenner@unity.ncsu.edu
Phone (919) 513-3090
Organization name NCSU
Street address
City Raleigh
State/province NC
ZIP/Postal code 27695
Country USA
 
Platform ID GPL2700
Series (1)
GSE8020 A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)

Data table header descriptions
ID_REF
RAW Raw signal intensities
VALUE median standardized log base 2 signal intensities

Data table
ID_REF RAW VALUE
GI_10047089-S 140.7 -0.1970916
GI_10047091-S 483.6 1.58410029
GI_10047093-S 189.1 0.22943541
GI_10047099-S 153.3 -0.0733563
GI_10047103-S 170.1 0.07666919
GI_10047105-S 159.4 -0.0170623
GI_10047121-S 146.5 -0.1388133
GI_10047123-S 271.4 0.75070677
GI_10047133-A 127.9 -0.3346977
GI_10047133-I 197.4 0.29140804
GI_10092578-S 176.2 0.12749997
GI_10092585-S 168.4 0.06217819
GI_10092596-S 162.3 0.00894905
GI_10092600-S 120.3 -0.4230773
GI_10092602-S 137.9 -0.2260915
GI_10092603-S 204 0.3388552
GI_10092611-A 118.4 -0.4460449
GI_10092616-S 184.1 0.19077568
GI_10092618-S 133.6 -0.2717939
GI_10092638-S 143.2 -0.1716825

Total number of rows: 24354

Table truncated, full table size 725 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap