NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM198058 Query DataSets for GSM198058
Status Public on Jun 13, 2007
Title Sample 11310, Slide 32020_E
Sample type RNA
 
Source name Whole Blood
Organism Canis rufus
Characteristics Sample 11310, Slide 32020_E, Male, Free Range
Extracted molecule total RNA
Extraction protocol Whole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction KitWhole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction Kit
Label Biotin
Label protocol Total RNA was biotin labeled using Ambion's Illumina RNA Amplification Kit
 
Hybridization protocol Arrays were hybridized overnight following Illumina's Ref-8 hybridization protocol
Scan protocol Arrays were scanned using Illumina's Beadstation Scanner on the Default settings
Description Whole Blood was collected in EDTA tubes and immediately mixed and stored in RNAlater.
All protocols were followed according to manufacturer's instructions
Data processing Raw Values were extracted from Array image files using Illumina's BeadStudio Software version 1.5.0.34. Normalized VALUEs represent median standardized log base 2 signal intensities.
 
Submission date Jun 05, 2007
Last update date Mar 08, 2012
Contact name Erin Kennerly
E-mail(s) emkenner@unity.ncsu.edu
Phone (919) 513-3090
Organization name NCSU
Street address
City Raleigh
State/province NC
ZIP/Postal code 27695
Country USA
 
Platform ID GPL2700
Series (1)
GSE8020 A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)

Data table header descriptions
ID_REF
RAW Raw signal intensities
VALUE median standardized log base 2 signal intensities

Data table
ID_REF RAW VALUE
GI_10047089-S 143.2 -0.3198981
GI_10047091-S 313.7 0.81145596
GI_10047093-S 219.9 0.29891803
GI_10047099-S 125.1 -0.5148478
GI_10047103-S 178.8 0.00041716
GI_10047105-S 188.3 0.07510343
GI_10047121-S 138.4 -0.3690856
GI_10047123-S 210.3 0.23451928
GI_10047133-A 156.6 -0.1908454
GI_10047133-I 166.1 -0.1058775
GI_10092578-S 181.6 0.02283463
GI_10092585-S 170.6 -0.0673119
GI_10092596-S 155.3 -0.2028717
GI_10092600-S 145.7 -0.2949287
GI_10092602-S 183.2 0.03548993
GI_10092603-S 210 0.23245975
GI_10092611-A 132.9 -0.4275885
GI_10092616-S 145.8 -0.2939389
GI_10092618-S 179.4 0.00525032
GI_10092638-S 174.1 -0.0380134

Total number of rows: 24354

Table truncated, full table size 725 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap