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Sample GSM198074 Query DataSets for GSM198074
Status Public on Jun 13, 2007
Title Sample 111080, Slide 32021_E
Sample type RNA
 
Source name Whole Blood
Organism Canis rufus
Characteristics Sample 111080, Slide 32021_E, Male, Free Range
Extracted molecule total RNA
Extraction protocol Whole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction KitWhole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction Kit
Label Biotin
Label protocol Total RNA was biotin labeled using Ambion's Illumina RNA Amplification Kit
 
Hybridization protocol Arrays were hybridized overnight following Illumina's Ref-8 hybridization protocol
Scan protocol Arrays were scanned using Illumina's Beadstation Scanner on the Default settings
Description Whole blood was collected in EDTA tubes and immediately mixed and stored with RNAlater.
All protocols were followed according to manufacturer's instructions.
Data processing Raw values were extracted from Array images using Illumina's BeadStudio Software Version 1.5.0.34. Normalized VALUEs represent median standardized log base 2 signal intensities.
 
Submission date Jun 05, 2007
Last update date Mar 08, 2012
Contact name Erin Kennerly
E-mail(s) emkenner@unity.ncsu.edu
Phone (919) 513-3090
Organization name NCSU
Street address
City Raleigh
State/province NC
ZIP/Postal code 27695
Country USA
 
Platform ID GPL2700
Series (1)
GSE8020 A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)

Data table header descriptions
ID_REF
RAW Raw signal intensities
VALUE median standardized log base 2 signal intensities

Data table
ID_REF RAW VALUE
GI_10047089-S 152.8 -0.2773944
GI_10047091-S 328.5 0.82685443
GI_10047093-S 217.5 0.23197646
GI_10047099-S 165.7 -0.1604653
GI_10047103-S 187.4 0.01708201
GI_10047105-S 193.2 0.06105615
GI_10047121-S 147.6 -0.3273462
GI_10047123-S 225.8 0.28600655
GI_10047133-A 148.8 -0.3156644
GI_10047133-I 174 -0.0899516
GI_10092578-S 172.7 -0.1007709
GI_10092585-S 153.1 -0.2745647
GI_10092596-S 144.7 -0.355974
GI_10092600-S 138.8 -0.4160314
GI_10092602-S 171.2 -0.1133562
GI_10092603-S 197.9 0.09573267
GI_10092611-A 135.1 -0.4550113
GI_10092616-S 162.7 -0.1868247
GI_10092618-S 195.5 0.07812967
GI_10092638-S 172.7 -0.1007709

Total number of rows: 24354

Table truncated, full table size 726 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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