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Sample GSM198078 Query DataSets for GSM198078
Status Public on Jun 13, 2007
Title Sample 11274, Slide 32022_A
Sample type RNA
 
Source name Whole blood
Organism Canis rufus
Characteristics Sample 11274, Slide 32022_A, Female, captive
Extracted molecule total RNA
Extraction protocol Whole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction KitWhole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction Kit
Label Biotin
Label protocol Total RNA was biotin labeled using Ambion's Illumina RNA Amplification Kit
 
Hybridization protocol Arrays were hybridized overnight following Illumina's Ref-8 hybridization protocol
Scan protocol Arrays were scanned using Illumina's Beadstation Scanner on the Default settings
Description Whole Blood was collected in EDTA tubes and immediately mixed and stored in RNAlater.
All protocols were followed according to manufacturer's instructions.
Data processing Raw values were extracted from Array images using Illumina's BeadStudio Software Version 1.5.0.34. Normalized VALUEs represent median standardized log base 2 signal intensities.
 
Submission date Jun 05, 2007
Last update date Mar 08, 2012
Contact name Erin Kennerly
E-mail(s) emkenner@unity.ncsu.edu
Phone (919) 513-3090
Organization name NCSU
Street address
City Raleigh
State/province NC
ZIP/Postal code 27695
Country USA
 
Platform ID GPL2700
Series (1)
GSE8020 A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)

Data table header descriptions
ID_REF
RAW Raw signal intensities
VALUE median standardized log base 2 signal intensities

Data table
ID_REF RAW VALUE
GI_10047089-S 177.6 -0.236795
GI_10047091-S 296.4 0.50211883
GI_10047093-S 186.5 -0.166251
GI_10047099-S 217.8 0.05757734
GI_10047103-S 227.8 0.12234113
GI_10047105-S 264.4 0.33729556
GI_10047121-S 167.7 -0.3195439
GI_10047123-S 223.5 0.09484821
GI_10047133-A 179.6 -0.2206393
GI_10047133-I 219.1 0.06616287
GI_10092578-S 166.2 -0.3325062
GI_10092585-S 201.6 -0.053931
GI_10092596-S 175.9 -0.2506711
GI_10092600-S 165.5 -0.3385954
GI_10092602-S 212.1 0.019318
GI_10092603-S 245 0.22735513
GI_10092611-A 169.9 -0.3007408
GI_10092616-S 183.6 -0.1888606
GI_10092618-S 195.9 -0.0953092
GI_10092638-S 211.2 0.01318322

Total number of rows: 24354

Table truncated, full table size 725 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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