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Sample GSM198087 Query DataSets for GSM198087
Status Public on Jun 13, 2007
Title Sample 11275, Slide 32024_B
Sample type RNA
 
Source name Whole blood
Organism Canis rufus
Characteristics Sample 11275, Slide 32024_B, Female, Captive
Extracted molecule total RNA
Extraction protocol Whole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction KitWhole Blood stored in RNALater was extracted using Ambion's RiboPure Blood RNA extraction Kit
Label Biotin
Label protocol Total RNA was biotin labeled using Ambion's Illumina RNA Amplification Kit
 
Hybridization protocol Arrays were hybridized overnight following Illumina's Ref-8 hybridization protocol
Scan protocol Arrays were scanned using Illumina's Beadstation Scanner on the Default settings
Description Whole Blood was collected in EDTA tubes and immediately mixed and stored in RNAlater.
All protocols were followed according to manufacturer's instructions.
Data processing Raw values were extracted from Array images using Illumina's BeadStudio Software Version 1.5.0.34. Normalized VALUEs represent median standardized log base 2 signal intensities.
 
Submission date Jun 05, 2007
Last update date Mar 08, 2012
Contact name Erin Kennerly
E-mail(s) emkenner@unity.ncsu.edu
Phone (919) 513-3090
Organization name NCSU
Street address
City Raleigh
State/province NC
ZIP/Postal code 27695
Country USA
 
Platform ID GPL2700
Series (1)
GSE8020 A gene expression signature of confinement in peripheral blood of red wolves (Canis rufus)

Data table header descriptions
ID_REF
RAW Raw signal intensities
VALUE median standardized log base 2 signal intensities

Data table
ID_REF RAW VALUE
GI_10047089-S 108.6 -0.3208206
GI_10047091-S 599.8 2.14463682
GI_10047093-S 106.4 -0.3503465
GI_10047099-S 106.1 -0.35442
GI_10047103-S 133.8 -0.0197666
GI_10047105-S 122.4 -0.1482411
GI_10047121-S 105.1 -0.368082
GI_10047123-S 315.5 1.2177953
GI_10047133-A 129.7 -0.0646662
GI_10047133-I 141.6 0.06197656
GI_10092578-S 172.1 0.3434024
GI_10092585-S 138.4 0.02899924
GI_10092596-S 118.6 -0.1937407
GI_10092600-S 106.2 -0.3530609
GI_10092602-S 129.8 -0.0635543
GI_10092603-S 273.8 1.01327775
GI_10092611-A 97 -0.483788
GI_10092616-S 130.2 -0.0591153
GI_10092618-S 123.6 -0.134166
GI_10092638-S 121.8 -0.1553306

Total number of rows: 24354

Table truncated, full table size 723 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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