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Sample GSM198357 Query DataSets for GSM198357
Status Public on May 29, 2008
Title E18 cortex GFP+ Prominin+ sample S3
Sample type RNA
 
Source name Facs-sorted cells from cortex of E18 embryos of hGFAP eGFP mice
Organism Mus musculus
Characteristics Selected by FACS for positive staining for prominin and GFP
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit (Qiagen) with on column DNase treatment
Label biotin
Label protocol MessageAmp II-Biotin Enhanced (Ambion, 1791)
 
Hybridization protocol Affymetrix Expression protocol
Scan protocol Affymetrix Expression protocol
Description Prospective isolation of radial glia subtypes – lineage and transcriptom analysis
Luisa Pinto1, Michael Mader1, Martin Irmler2, Marco Gentilini3, Federico Santoni4, Vassiliki Nikoletopoulou5, Steven Pollard6, Alessandro Bulfone3, Yves Barde5, Johannes Beckers2, and Magdalena Götz1,7,8
Data processing Mas 5.0
 
Submission date Jun 06, 2007
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) beckers@helmholtz-muenchen.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE8034 Prospective isolation of functionally distinct radial glial subtypes - lineage and transcriptome analysis
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas5
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 368.165 P 5.16732e-05
AFFX-BioB-M_at 517.95 P 4.42873e-05
AFFX-BioB-3_at 364.245 P 5.16732e-05
AFFX-BioC-5_at 694.213 P 4.42873e-05
AFFX-BioC-3_at 1037.25 P 4.42873e-05
AFFX-BioDn-5_at 1855.86 P 4.42873e-05
AFFX-BioDn-3_at 3671.5 P 4.42873e-05
AFFX-CreX-5_at 12007.1 P 5.16732e-05
AFFX-CreX-3_at 13855 P 4.42873e-05
AFFX-DapX-5_at 36.2933 P 0.000508897
AFFX-DapX-M_at 251.871 P 0.000855711
AFFX-DapX-3_at 837.164 P 5.16732e-05
AFFX-LysX-5_at 27.3002 P 0.00110197
AFFX-LysX-M_at 68.6828 P 0.000445901
AFFX-LysX-3_at 192.96 P 0.000126798
AFFX-PheX-5_at 20.4968 A 0.131361
AFFX-PheX-M_at 52.2807 P 0.000581214
AFFX-PheX-3_at 117.36 P 0.00010954
AFFX-ThrX-5_at 31.7027 P 0.00844047
AFFX-ThrX-M_at 39.552 P 0.00499819

Total number of rows: 45101

Table truncated, full table size 1380 Kbytes.




Supplementary file Size Download File type/resource
GSM198357.CEL.gz 3.1 Mb (ftp)(http) CEL
GSM198357.CHP.gz 252.3 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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