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Sample GSM198361 Query DataSets for GSM198361
Status Public on May 29, 2008
Title E18 cortex GFP+ Prominin+ cells, sample S2
Sample type RNA
 
Source name FACS-sorted cells from cortex of E18 embryos of hGFAP eGFP mice
Organism Mus musculus
Characteristics Selected by FACS for positive staining for prominin and GFP
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit (Qiagen) with on column DNase treatment
Label biotin
Label protocol MessageAmp II-Biotin Enhanced (Ambion, 1791)
 
Hybridization protocol Affymetrix Expression protocol
Scan protocol Affymetrix Expression protocol
Description Prospective isolation of radial glia subtypes – lineage and transcriptom analysis
Luisa Pinto1, Michael Mader1, Martin Irmler2, Marco Gentilini3, Federico Santoni4, Vassiliki Nikoletopoulou5, Steven Pollard6, Alessandro Bulfone3, Yves Barde5, Johannes Beckers2, and Magdalena Götz1,7,8
Data processing Mas 5.0
 
Submission date Jun 06, 2007
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) beckers@helmholtz-muenchen.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE8034 Prospective isolation of functionally distinct radial glial subtypes - lineage and transcriptome analysis
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas 5.0
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 318.53 P 5.16732e-05
AFFX-BioB-M_at 444.259 P 4.42873e-05
AFFX-BioB-3_at 302.279 P 4.42873e-05
AFFX-BioC-5_at 854.494 P 4.42873e-05
AFFX-BioC-3_at 1127.09 P 4.42873e-05
AFFX-BioDn-5_at 1838.15 P 4.42873e-05
AFFX-BioDn-3_at 3419.86 P 4.42873e-05
AFFX-CreX-5_at 10752.7 P 5.16732e-05
AFFX-CreX-3_at 12748.7 P 4.42873e-05
AFFX-DapX-5_at 386.55 P 6.02111e-05
AFFX-DapX-M_at 1175.73 P 8.14279e-05
AFFX-DapX-3_at 2251.4 P 4.42873e-05
AFFX-LysX-5_at 118.305 P 5.16732e-05
AFFX-LysX-M_at 200.763 P 5.16732e-05
AFFX-LysX-3_at 538.789 P 6.02111e-05
AFFX-PheX-5_at 162.061 P 5.16732e-05
AFFX-PheX-M_at 236.057 P 6.02111e-05
AFFX-PheX-3_at 318.662 P 4.42873e-05
AFFX-ThrX-5_at 115.118 P 6.02111e-05
AFFX-ThrX-M_at 231.083 P 4.42246e-05

Total number of rows: 45101

Table truncated, full table size 1381 Kbytes.




Supplementary file Size Download File type/resource
GSM198361.CEL.gz 3.0 Mb (ftp)(http) CEL
GSM198361.CHP.gz 251.9 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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