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Sample GSM198363 Query DataSets for GSM198363
Status Public on May 29, 2008
Title E18 cortex GFP+ Prominin+ cells, sample S5
Sample type RNA
 
Source name FACS-sorted cells from cortex of E18 embryos of hGFAP eGFP mice
Organism Mus musculus
Characteristics Selected by FACS for positive staining for prominin and GFP
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit (Qiagen) with on column DNase treatment
Label biotin
Label protocol MessageAmp II-Biotin Enhanced (Ambion, 1791)
 
Hybridization protocol Affymetrix Expression protocol
Scan protocol Affymetrix Expression protocol
Description Prospective isolation of radial glia subtypes – lineage and transcriptom analysis
Luisa Pinto1, Michael Mader1, Martin Irmler2, Marco Gentilini3, Federico Santoni4, Vassiliki Nikoletopoulou5, Steven Pollard6, Alessandro Bulfone3, Yves Barde5, Johannes Beckers2, and Magdalena Götz1,7,8
Data processing Mas 5.0
 
Submission date Jun 06, 2007
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) beckers@helmholtz-muenchen.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE8034 Prospective isolation of functionally distinct radial glial subtypes - lineage and transcriptome analysis
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas 5.0
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 447.307 P 5.16732e-05
AFFX-BioB-M_at 757.922 P 4.42873e-05
AFFX-BioB-3_at 412.168 P 4.42873e-05
AFFX-BioC-5_at 1322.93 P 4.42873e-05
AFFX-BioC-3_at 1607.78 P 4.42873e-05
AFFX-BioDn-5_at 2709.27 P 4.42873e-05
AFFX-BioDn-3_at 4970.96 P 4.42873e-05
AFFX-CreX-5_at 14648.4 P 5.16732e-05
AFFX-CreX-3_at 17171.1 P 4.42873e-05
AFFX-DapX-5_at 250.284 P 6.02111e-05
AFFX-DapX-M_at 919.379 P 9.4506e-05
AFFX-DapX-3_at 2355.97 P 4.42873e-05
AFFX-LysX-5_at 109.275 P 0.000169227
AFFX-LysX-M_at 186.959 P 4.42873e-05
AFFX-LysX-3_at 455.496 P 5.16732e-05
AFFX-PheX-5_at 110.794 P 4.42246e-05
AFFX-PheX-M_at 202.129 P 5.16732e-05
AFFX-PheX-3_at 355.125 P 5.16732e-05
AFFX-ThrX-5_at 82.0541 P 0.000445901
AFFX-ThrX-M_at 157.444 P 4.42873e-05

Total number of rows: 45101

Table truncated, full table size 1377 Kbytes.




Supplementary file Size Download File type/resource
GSM198363.CEL.gz 3.0 Mb (ftp)(http) CEL
GSM198363.CHP.gz 252.7 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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