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Sample GSM200045 Query DataSets for GSM200045
Status Public on May 29, 2008
Title E14 cortex GFPlow Prominin+ cells, sample S3
Sample type RNA
Source name FACS-sorted cells from cortex of E14 embryos of hGFAP eGFP mice
Organism Mus musculus
Characteristics Selected by FACS for positive staining for prominin and GFP
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit (Qiagen) with on column DNase treatment
Label Biotin
Label protocol MessageAmp II-Biotin Enhanced (Ambion, 1791)
Hybridization protocol Affymetrix Expression protocol
Scan protocol Affymetrix Expression protocol
Description Prospective isolation of radial glia subtypes – lineage and transcriptom analysis Luisa Pinto1, Michael Mader1, Martin Irmler2, Marco Gentilini3, Federico Santoni4, Vassiliki Nikoletopoulou5, Steven Pollard6, Alessandro Bulfone3, Yves Barde5, Johannes Beckers2, and Magdalena Götz1,7,8
Data processing Mas 5.0
Submission date Jun 11, 2007
Last update date Aug 28, 2018
Contact name Johannes Beckers
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
Platform ID GPL1261
Series (1)
GSE8034 Prospective isolation of functionally distinct radial glial subtypes - lineage and transcriptome analysis
Reanalyzed by GSE119085

Data table header descriptions
VALUE Mas 5.0

Data table
AFFX-BioB-5_at 294.251 P 0.00010954
AFFX-BioB-M_at 534.914 P 4.42873e-05
AFFX-BioB-3_at 324.841 P 0.00010954
AFFX-BioC-5_at 754.79 P 4.42873e-05
AFFX-BioC-3_at 963.428 P 4.42873e-05
AFFX-BioDn-5_at 1443.97 P 4.42873e-05
AFFX-BioDn-3_at 3176.61 P 4.42873e-05
AFFX-CreX-5_at 10509.8 P 4.42873e-05
AFFX-CreX-3_at 11785.1 P 4.42873e-05
AFFX-DapX-5_at 25.4819 A 0.559354
AFFX-DapX-M_at 2.36714 A 0.993129
AFFX-DapX-3_at 4.93736 A 0.852061
AFFX-LysX-5_at 10.0481 A 0.804734
AFFX-LysX-M_at 13.598 A 0.368438
AFFX-LysX-3_at 8.24821 A 0.631562
AFFX-PheX-5_at 5.4163 A 0.834139
AFFX-PheX-M_at 3.16159 A 0.945787
AFFX-PheX-3_at 12.4211 A 0.772364
AFFX-ThrX-5_at 12.6026 A 0.645547
AFFX-ThrX-M_at 19.7967 A 0.440646

Total number of rows: 45101

Table truncated, full table size 1366 Kbytes.

Supplementary file Size Download File type/resource
GSM200045.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM200045.CHP.gz 246.6 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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