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Sample GSM200058 Query DataSets for GSM200058
Status Public on May 29, 2008
Title E14 cortex GFPhigh Prominin+ cells, sample S4
Sample type RNA
 
Source name FACS-sorted cells from cortex of E14 embryos of hGFAP eGFP mice
Organism Mus musculus
Characteristics Selected by FACS for positive staining for prominin and GFP
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit (Qiagen) with on column DNase treatment
Label Biotin
Label protocol MessageAmp II-Biotin Enhanced (Ambion, 1791)
 
Hybridization protocol Affymetrix Expression protocol
Scan protocol Affymetrix Expression protocol
Description Prospective isolation of radial glia subtypes – lineage and transcriptom analysis Luisa Pinto1, Michael Mader1, Martin Irmler2, Marco Gentilini3, Federico Santoni4, Vassiliki Nikoletopoulou5, Steven Pollard6, Alessandro Bulfone3, Yves Barde5, Johannes Beckers2, and Magdalena Götz1,7,8
Data processing Mas 5.0
 
Submission date Jun 11, 2007
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) beckers@helmholtz-muenchen.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE8034 Prospective isolation of functionally distinct radial glial subtypes - lineage and transcriptome analysis
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas 5.0
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 256.834 P 5.16732e-05
AFFX-BioB-M_at 456.13 P 4.42873e-05
AFFX-BioB-3_at 279.087 P 5.16732e-05
AFFX-BioC-5_at 702.925 P 4.42873e-05
AFFX-BioC-3_at 944.374 P 4.42873e-05
AFFX-BioDn-5_at 1497.02 P 4.42873e-05
AFFX-BioDn-3_at 3010.64 P 4.42873e-05
AFFX-CreX-5_at 9787.7 P 5.16732e-05
AFFX-CreX-3_at 11056.4 P 4.42873e-05
AFFX-DapX-5_at 4.45233 A 0.724889
AFFX-DapX-M_at 11.6109 A 0.108959
AFFX-DapX-3_at 0.632402 A 0.986196
AFFX-LysX-5_at 5.57487 A 0.544587
AFFX-LysX-M_at 8.89645 A 0.287743
AFFX-LysX-3_at 0.860248 A 0.824672
AFFX-PheX-5_at 0.441828 A 0.891021
AFFX-PheX-M_at 0.829188 A 0.937071
AFFX-PheX-3_at 7.51528 A 0.440646
AFFX-ThrX-5_at 7.98493 A 0.227636
AFFX-ThrX-M_at 1.67484 A 0.603089

Total number of rows: 45101

Table truncated, full table size 1383 Kbytes.




Supplementary file Size Download File type/resource
GSM200058.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM200058.CHP.gz 248.4 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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