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Sample GSM200061 Query DataSets for GSM200061
Status Public on May 29, 2008
Title E14 cortex GFPlow cells sample 1
Sample type RNA
 
Source name FACS-sorted cells from cortex of E14 embryos of hGFAP eGFP mice
Organism Mus musculus
Characteristics Selected by FACS for positive staining for GFP
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit (Qiagen) with on column DNase treatment
Label Biotin
Label protocol GeneChip® IVT Labeling Kit (single round, Affymetrix)
 
Hybridization protocol Affymetrix Expression protocol
Scan protocol Affymetrix Expression protocol
Description Prospective isolation of radial glia subtypes – lineage and transcriptom analysis Luisa Pinto1, Michael Mader1, Martin Irmler2, Marco Gentilini3, Federico Santoni4, Vassiliki Nikoletopoulou5, Steven Pollard6, Alessandro Bulfone3, Yves Barde5, Johannes Beckers2, and Magdalena Götz1,7,8
Data processing Mas 5.0
 
Submission date Jun 11, 2007
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) beckers@helmholtz-muenchen.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE8034 Prospective isolation of functionally distinct radial glial subtypes - lineage and transcriptome analysis
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas 5.0
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 680.789 P 0.00010954
AFFX-BioB-M_at 1555.39 P 4.42873e-05
AFFX-BioB-3_at 1054.57 P 4.42873e-05
AFFX-BioC-5_at 1621.41 P 4.42873e-05
AFFX-BioC-3_at 1817.55 P 4.42873e-05
AFFX-BioDn-5_at 2624.25 P 4.42873e-05
AFFX-BioDn-3_at 8582.25 P 4.42873e-05
AFFX-CreX-5_at 19121.9 P 4.42873e-05
AFFX-CreX-3_at 22018.6 P 4.42873e-05
AFFX-DapX-5_at 162.633 P 4.42873e-05
AFFX-DapX-M_at 341.58 P 0.000856509
AFFX-DapX-3_at 670.462 P 7.00668e-05
AFFX-LysX-5_at 33.4794 P 0.0284573
AFFX-LysX-M_at 57.1616 P 0.000972149
AFFX-LysX-3_at 103.707 P 0.000126798
AFFX-PheX-5_at 33.3073 P 0.00556451
AFFX-PheX-M_at 70.4722 P 0.0032123
AFFX-PheX-3_at 84.3575 P 6.02111e-05
AFFX-ThrX-5_at 49.7437 P 0.000662269
AFFX-ThrX-M_at 80.7527 P 7.00668e-05

Total number of rows: 45101

Table truncated, full table size 1373 Kbytes.




Supplementary file Size Download File type/resource
GSM200061.CEL.gz 3.2 Mb (ftp)(http) CEL
GSM200061.CHP.gz 250.7 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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