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Sample GSM200581 Query DataSets for GSM200581
Status Public on May 29, 2008
Title E14 cortex GFPlow cells sample 2
Sample type RNA
 
Source name FACS-sorted cells from cortex of E14 embryos of hGFAP eGFP mice
Organism Mus musculus
Characteristics Selected by FACS for positive staining for GFP
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit (Qiagen) with on column DNase treatment
Label Biotin
Label protocol GeneChip® IVT Labeling Kit (single round, Affymetrix)
 
Hybridization protocol Affymetrix Expression protocol
Scan protocol Affymetrix Expression protocol
Description Prospective isolation of radial glia subtypes – lineage and transcriptom analysis Luisa Pinto1, Michael Mader1, Martin Irmler2, Marco Gentilini3, Federico Santoni4, Vassiliki Nikoletopoulou5, Steven Pollard6, Alessandro Bulfone3, Yves Barde5, Johannes Beckers2, and Magdalena Götz1,7,8
Data processing Mas 5.0
 
Submission date Jun 11, 2007
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) beckers@helmholtz-muenchen.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE8034 Prospective isolation of functionally distinct radial glial subtypes - lineage and transcriptome analysis
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas 5.0
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 727.457 P 0.000445901
AFFX-BioB-M_at 1556.08 P 4.42873e-05
AFFX-BioB-3_at 1111.62 P 4.42873e-05
AFFX-BioC-5_at 2224.88 P 4.42873e-05
AFFX-BioC-3_at 2121.67 P 5.16732e-05
AFFX-BioDn-5_at 3085.21 P 4.42873e-05
AFFX-BioDn-3_at 14315.8 P 4.42873e-05
AFFX-CreX-5_at 32349.2 P 4.42873e-05
AFFX-CreX-3_at 37624.2 P 4.42873e-05
AFFX-DapX-5_at 125.993 P 0.000509415
AFFX-DapX-M_at 254.783 P 0.000856509
AFFX-DapX-3_at 613.422 P 0.00010954
AFFX-LysX-5_at 28.8377 A 0.327079
AFFX-LysX-M_at 55.6665 A 0.0726999
AFFX-LysX-3_at 55.3403 P 0.00359458
AFFX-PheX-5_at 34.0078 A 0.156732
AFFX-PheX-M_at 26.4924 A 0.440646
AFFX-PheX-3_at 76.0889 P 0.0125468
AFFX-ThrX-5_at 39.8945 A 0.313723
AFFX-ThrX-M_at 48.0445 P 0.00359458

Total number of rows: 45101

Table truncated, full table size 1362 Kbytes.




Supplementary file Size Download File type/resource
GSM200581.CEL.gz 3.0 Mb (ftp)(http) CEL
GSM200581.CHP.gz 253.6 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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