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Sample GSM200582 Query DataSets for GSM200582
Status Public on May 29, 2008
Title E14 cortex GFPhigh cells sample 3
Sample type RNA
 
Source name FACS-sorted cells from cortex of E14 embryos of hGFAP eGFP mice
Organism Mus musculus
Characteristics Selected by FACS for positive staining for GFP
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit (Qiagen) with on column DNase treatment
Label Biotin
Label protocol GeneChip® IVT Labeling Kit (single round, Affymetrix)
 
Hybridization protocol Affymetrix Expression protocol
Scan protocol Affymetrix Expression protocol
Description Prospective isolation of radial glia subtypes – lineage and transcriptom analysis Luisa Pinto1, Michael Mader1, Martin Irmler2, Marco Gentilini3, Federico Santoni4, Vassiliki Nikoletopoulou5, Steven Pollard6, Alessandro Bulfone3, Yves Barde5, Johannes Beckers2, and Magdalena Götz1,7,8
Data processing Mas 5.0
 
Submission date Jun 11, 2007
Last update date Aug 28, 2018
Contact name Johannes Beckers
E-mail(s) beckers@helmholtz-muenchen.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE8034 Prospective isolation of functionally distinct radial glial subtypes - lineage and transcriptome analysis
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Mas 5.0
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 832.552 P 7.00668e-05
AFFX-BioB-M_at 1875.84 P 4.42873e-05
AFFX-BioB-3_at 1177.82 P 4.42873e-05
AFFX-BioC-5_at 2188.16 P 4.42873e-05
AFFX-BioC-3_at 2184.9 P 5.16732e-05
AFFX-BioDn-5_at 3369.9 P 4.42873e-05
AFFX-BioDn-3_at 10963.6 P 4.42873e-05
AFFX-CreX-5_at 23694.8 P 4.42873e-05
AFFX-CreX-3_at 26451.3 P 4.42873e-05
AFFX-DapX-5_at 303.044 P 8.14279e-05
AFFX-DapX-M_at 495.47 P 0.000581214
AFFX-DapX-3_at 809.4 P 6.02111e-05
AFFX-LysX-5_at 60.7914 P 0.00124642
AFFX-LysX-M_at 71.5823 P 0.00499819
AFFX-LysX-3_at 182.521 P 0.000340305
AFFX-PheX-5_at 38.6728 P 0.00255359
AFFX-PheX-M_at 79.1933 P 0.0061833
AFFX-PheX-3_at 108.801 P 0.000389797
AFFX-ThrX-5_at 42.6175 M 0.0542134
AFFX-ThrX-M_at 114.932 P 0.000195116

Total number of rows: 45101

Table truncated, full table size 1372 Kbytes.




Supplementary file Size Download File type/resource
GSM200582.CEL.gz 3.1 Mb (ftp)(http) CEL
GSM200582.CHP.gz 250.6 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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