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Sample GSM205937 Query DataSets for GSM205937
Status Public on Aug 08, 2008
Title cerebellum_PS-/-_ 10d_rep2
Sample type RNA
 
Source name PS-/- cerebellum at 10 days
Organism Mus musculus
Characteristics 10 days old prosaposin knockout mice, cerebellum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Prosaposin null mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415670_at 12131.6 P 0.000244
1415671_at 30254.1 P 0.000244
1415672_at 11027.7 P 0.000244
1415673_at 3214.8 P 0.000732
1415674_a_at 8848.1 P 0.000244
1415675_at 4073.2 P 0.000244
1415676_a_at 29106.7 P 0.000244
1415677_at 5421.7 P 0.000244
1415678_at 8945 P 0.000244
1415679_at 16273.8 P 0.000244
1415680_at 3279.7 P 0.000244
1415681_at 7885.3 P 0.000244
1415682_at 1765.4 P 0.000244
1415683_at 11507.5 P 0.000244
1415684_at 1424.7 P 0.000244
1415685_at 1643.5 P 0.000244
1415686_at 5178.1 P 0.000244
1415687_a_at 1139.4 P 0.000244
1415688_at 9142.6 P 0.000244
1415689_s_at 1124.6 P 0.000244

Total number of rows: 45101

Table truncated, full table size 1233 Kbytes.




Supplementary file Size Download File type/resource
GSM205937.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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