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Sample GSM205969 Query DataSets for GSM205969
Status Public on Aug 08, 2008
Title cerebellum_4LPSNA_ 12w_rep2
Sample type RNA
 
Source name 4L/PS-NA cerebellum at 12 weeks
Organism Mus musculus
Characteristics 12 weeks old 4L/PS-NA mice, cerebellum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description V394L/V394L glucocerebrosidase mutation and PS-NA mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415670_at 6377.6 P 0.000244
1415671_at 24629.2 P 0.000244
1415672_at 17503.4 P 0.000244
1415673_at 3060.9 P 0.000732
1415674_a_at 5434 P 0.000244
1415675_at 2543 P 0.000244
1415676_a_at 16811.4 P 0.000244
1415677_at 7979.8 P 0.000244
1415678_at 11265.9 P 0.000244
1415679_at 12417 P 0.000244
1415680_at 1517.8 P 0.000244
1415681_at 5674.6 P 0.000244
1415682_at 2083.2 P 0.000244
1415683_at 9004.1 P 0.000244
1415684_at 2738.4 P 0.000244
1415685_at 2724.5 P 0.000244
1415686_at 6743 P 0.000244
1415687_a_at 7119.5 P 0.000244
1415688_at 8573.7 P 0.000244
1415689_s_at 1149.5 P 0.000244

Total number of rows: 45101

Table truncated, full table size 1234 Kbytes.




Supplementary file Size Download File type/resource
GSM205969.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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