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Sample GSM205970 Query DataSets for GSM205970
Status Public on Aug 08, 2008
Title cerebellum_4LPSNA_ 18w_rep1
Sample type RNA
 
Source name 4L/PS-NA cerebellum at 18 weeks
Organism Mus musculus
Characteristics 18 weeks old 4L/PS-NA mice, cerebellum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description V394L/V394L glucocerebrosidase mutation and PS-NA mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415670_at 8769.1 P 0.000244
1415671_at 24673.3 P 0.000244
1415672_at 17444 P 0.000244
1415673_at 2451.5 P 0.000732
1415674_a_at 5958.1 P 0.000244
1415675_at 3640 P 0.000244
1415676_a_at 16622.2 P 0.000244
1415677_at 11737.9 P 0.000244
1415678_at 9578.4 P 0.000244
1415679_at 15747.5 P 0.000244
1415680_at 1841.2 P 0.000244
1415681_at 5422.5 P 0.000244
1415682_at 2516.4 P 0.000732
1415683_at 8432.2 P 0.000244
1415684_at 2161.2 P 0.000244
1415685_at 2666 P 0.000244
1415686_at 5687.8 P 0.000244
1415687_a_at 6691.1 P 0.000244
1415688_at 7277.9 P 0.000244
1415689_s_at 1188.2 P 0.000244

Total number of rows: 45101

Table truncated, full table size 1239 Kbytes.




Supplementary file Size Download File type/resource
GSM205970.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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