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Sample GSM205974 Query DataSets for GSM205974
Status Public on Aug 08, 2008
Title cerebrum_4LPSNA_ 12w_rep1
Sample type RNA
 
Source name 4L/PS-NA cerebrum at 12 weeks
Organism Mus musculus
Characteristics 12 weeks old 4L/PS-NA mice, cerebrum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description V394L/V394L glucocerebrosidase mutation and PS-NA mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415670_at 6673.6 P 0.000244
1415671_at 27902 P 0.000244
1415672_at 17153.3 P 0.000244
1415673_at 3223.8 P 0.000732
1415674_a_at 6756.7 P 0.000244
1415675_at 4003.4 P 0.000244
1415676_a_at 18875.1 P 0.000244
1415677_at 7282.2 P 0.000244
1415678_at 11273.9 P 0.000244
1415679_at 12261.9 P 0.000244
1415680_at 1103.6 P 0.000732
1415681_at 5212.1 P 0.000244
1415682_at 1949.1 P 0.000244
1415683_at 9484.1 P 0.000244
1415684_at 2346.7 P 0.000244
1415685_at 2469.6 P 0.000244
1415686_at 7198.6 P 0.000244
1415687_a_at 8169.6 P 0.000244
1415688_at 7767.7 P 0.000244
1415689_s_at 866.9 P 0.000244

Total number of rows: 45101

Table truncated, full table size 1237 Kbytes.




Supplementary file Size Download File type/resource
GSM205974.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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