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Sample GSM205994 Query DataSets for GSM205994
Status Public on Aug 08, 2008
Title cerebrum_WT_20d_rep1
Sample type RNA
 
Source name WILDTYPE cerebrum at 20 days
Organism Mus musculus
Characteristics 20 days normal mice, cerebrum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Wildtype control mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1415670_at 5093 P 0.000244
1415671_at 27945.7 P 0.000244
1415672_at 21339.8 P 0.000244
1415673_at 2616 P 0.000732
1415674_a_at 6693.3 P 0.000244
1415675_at 3906.5 P 0.000244
1415676_a_at 18355.9 P 0.000244
1415677_at 4357.8 P 0.000244
1415678_at 8035.4 P 0.000244
1415679_at 14412.1 P 0.000244
1415680_at 1717.9 P 0.001953
1415681_at 4001 P 0.000244
1415682_at 1467.1 P 0.001221
1415683_at 8234.4 P 0.000244
1415684_at 1265 P 0.000244
1415685_at 2299.5 P 0.000244
1415686_at 5268.5 P 0.000244
1415687_a_at 38101.9 P 0.000244
1415688_at 8249.1 P 0.000244
1415689_s_at 747.6 P 0.005859

Total number of rows: 45101

Table truncated, full table size 1240 Kbytes.




Supplementary file Size Download File type/resource
GSM205994.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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