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Sample GSM205997 Query DataSets for GSM205997
Status Public on Aug 08, 2008
Title cerebrum_WT_4w_rep2
Sample type RNA
 
Source name WILDTYPE cerebrum at 4 weeks
Organism Mus musculus
Characteristics 4 weeks normal mice, cerebrum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Wildtype control mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
Detection
Detection p-value

Data table
ID_REF VALUE Detection Detection p-value
1415670_at 3552.9 P 0.000244
1415671_at 25493.5 P 0.000244
1415672_at 25232.3 P 0.000244
1415673_at 2478.7 P 0.000732
1415674_a_at 5888.1 P 0.000244
1415675_at 3598.3 P 0.000244
1415676_a_at 15981.5 P 0.000244
1415677_at 4197.5 P 0.000244
1415678_at 11768.7 P 0.000244
1415679_at 11017.5 P 0.000244
1415680_at 1483.1 P 0.001953
1415681_at 6262.9 P 0.000244
1415682_at 1553.3 P 0.000732
1415683_at 8322 P 0.000244
1415684_at 1808.8 P 0.000244
1415685_at 3200.4 P 0.000244
1415686_at 5733.1 P 0.000244
1415687_a_at 44169.6 P 0.000244
1415688_at 10537.7 P 0.000244
1415689_s_at 1147 P 0.001953

Total number of rows: 45101

Table truncated, full table size 1239 Kbytes.




Supplementary file Size Download File type/resource
GSM205997.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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