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Sample GSM206000 Query DataSets for GSM206000
Status Public on Aug 08, 2008
Title cerebrum_WT_18w_rep1
Sample type RNA
 
Source name WILDTYPE cerebrum at 18 weeks
Organism Mus musculus
Characteristics 18 weeks normal mice, cerebrum
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TOTALLY RNA kit (Ambion Inc.) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
 
Hybridization protocol cRNAs were hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 Array.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000
Description Wildtype control mice
Data processing The data were analyzed with GeneChip Operating Software 1.1 (GCOS 1.1) using Affymetrix default analysis settings and global scaling to the same target intensity value
 
Submission date Aug 08, 2007
Last update date Aug 28, 2018
Contact name nupur dasgupta
Phone 513-803-1768
Organization name Cincinnati Children's Hopital Medical Center
Street address 3333 Burnet Ave.
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL1261
Series (1)
GSE8307 Expression and neurobehavioral analyses in prosaposin deficient mice: Molecular alterations precede neuronal deficits
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE normalized signal intensity
Detection
Detection p-value

Data table
ID_REF VALUE Detection Detection p-value
1415670_at 10656.7 P 0.000244
1415671_at 27801.5 P 0.000244
1415672_at 11948.7 P 0.000244
1415673_at 3124.4 P 0.000732
1415674_a_at 5805.2 P 0.000244
1415675_at 3198.9 P 0.000244
1415676_a_at 19913.6 P 0.000244
1415677_at 5913.3 P 0.000244
1415678_at 8609.1 P 0.000244
1415679_at 11309.8 P 0.000244
1415680_at 1979.5 P 0.000244
1415681_at 5271.6 P 0.000244
1415682_at 2169.7 P 0.000244
1415683_at 12039.9 P 0.000244
1415684_at 1317.2 P 0.000244
1415685_at 2419.6 P 0.000244
1415686_at 5397.1 P 0.000244
1415687_a_at 53395.9 P 0.000244
1415688_at 7047.1 P 0.000244
1415689_s_at 718 P 0.001221

Total number of rows: 45101

Table truncated, full table size 1239 Kbytes.




Supplementary file Size Download File type/resource
GSM206000.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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