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Sample GSM206335 Query DataSets for GSM206335
Status Public on Mar 06, 2008
Title ATF6-MER TG mouse_tamoxifen3
Sample type RNA
 
Source name TG mouse left ventricle
Organism Mus musculus
Characteristics Transgenic ATF6-MER mouse
Strain: C57 BL/6
Gender: male
Age: ~30wk
Tissue: heart LV
treatment: tamoxifen
Extracted molecule total RNA
Extraction protocol Tel-Test Inc. RNAzol
Label See Affymetrix Gene Expression protocol
Label protocol See Affymetrix Gene Expression protocol
 
Hybridization protocol See Affymetrix Gene Expression protocol
Scan protocol See Affymetrix Gene Expression protocol
Description See Affymetrix Gene Expression protocol
Data processing See Affymetrix Gene Expression protocol
 
Submission date Jun 28, 2007
Last update date Aug 28, 2018
Contact name Peter J Belmont
Organization name Pfizer
Street address 10724 Science Center Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1261
Series (1)
GSE8322 Identification of MCIP1 as an ATF6-inducible ER Stress Response Gene in the Heart by Gene Expression Profiling
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Qualitative call made by the software as to whether the sample was detectable. Abs_call means absent.
DETECTION P-VALUE Likelihood of transcript being present (closer to 0 is more likely)

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 6327.38 P 0.000340305
AFFX-BioB-M_at 9076.25 P 4.42873e-05
AFFX-BioB-3_at 5867.28 P 4.42873e-05
AFFX-BioC-5_at 15891 P 6.02111e-05
AFFX-BioC-3_at 17853.1 P 4.42873e-05
AFFX-BioDn-5_at 36424.8 P 4.42873e-05
AFFX-BioDn-3_at 87490.3 P 5.16732e-05
AFFX-CreX-5_at 231767 P 5.16732e-05
AFFX-CreX-3_at 237800 P 4.42873e-05
AFFX-DapX-5_at 41.1593 A 0.712257
AFFX-DapX-M_at 108.94 A 0.699394
AFFX-DapX-3_at 113.769 A 0.824672
AFFX-LysX-5_at 55.6706 A 0.724854
AFFX-LysX-M_at 350.651 A 0.559354
AFFX-LysX-3_at 83.7889 A 0.48511
AFFX-PheX-5_at 106.978 A 0.659339
AFFX-PheX-M_at 71.3398 A 0.852061
AFFX-PheX-3_at 191.91 A 0.574038
AFFX-ThrX-5_at 177.512 A 0.737173
AFFX-ThrX-M_at 113.229 A 0.712257

Total number of rows: 45101

Table truncated, full table size 1363 Kbytes.




Supplementary file Size Download File type/resource
GSM206335.CEL.gz 3.6 Mb (ftp)(http) CEL
GSM206335.CHP.gz 241.1 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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