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Sample GSM2113013 Query DataSets for GSM2113013
Status Public on Jul 01, 2016
Title wt_untreated_1
Sample type RNA
 
Source name wt_untreated
Organism Mus musculus
Characteristics strain: CD-1
gender: male
genotype/variation: wild-type
agent: untreated
time: control
tissue: Brunner’s glands
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label biotin
Label protocol Affymetrix in vitro transcription
 
Hybridization protocol Affymetrix EukGE-WS2v5
Scan protocol Affymetrix cel analysis
Data processing Bioconductor/R RMA
 
Submission date Apr 11, 2016
Last update date Jul 01, 2016
Contact name Klaus Stensgaard Frederiksen
Organization name Novo Nordisk A/S
Department Molecular Genetics
Street address Novo Nordisk Park F9.1.07
City Måløv
ZIP/Postal code DK-2760
Country Denmark
 
Platform ID GPL20766
Series (1)
GSE80119 Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
ENSMUSG00000000001_at 9.63595
ENSMUSG00000000003_at 3.55399
ENSMUSG00000000028_at 5.14056
ENSMUSG00000000031_at 4.24488
ENSMUSG00000000037_at 4.38786
ENSMUSG00000000049_at 5.27338
ENSMUSG00000000056_at 5.49516
ENSMUSG00000000058_at 6.98018
ENSMUSG00000000078_at 5.21343
ENSMUSG00000000085_at 6.46502
ENSMUSG00000000088_at 11.73165
ENSMUSG00000000093_at 5.14508
ENSMUSG00000000094_at 4.30441
ENSMUSG00000000103_at 4.4146
ENSMUSG00000000120_at 4.46292
ENSMUSG00000000125_at 3.31106
ENSMUSG00000000126_at 4.35518
ENSMUSG00000000127_at 4.58986
ENSMUSG00000000131_at 8.055
ENSMUSG00000000134_at 7.74224

Total number of rows: 17204

Table truncated, full table size 502 Kbytes.




Supplementary file Size Download File type/resource
GSM2113013_1.CEL.gz 4.0 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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