GEO help: Mouse over screen elements for information.
Status
Public on Jul 01, 2016
Title
wt_exendin (18h)_12
Sample type
RNA
Source name
wt_exendin (18h)
Organism
Mus musculus
Characteristics
strain: CD-1 gender: male genotype/variation: wild-type agent: exendin-4 time: 18h tissue: Brunner’s glands
Extracted molecule
total RNA
Extraction protocol
Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label
biotin
Label protocol
Affymetrix in vitro transcription
Hybridization protocol
Affymetrix EukGE-WS2v5
Scan protocol
Affymetrix cel analysis
Data processing
Bioconductor/R RMA
Submission date
Apr 11, 2016
Last update date
Jul 01, 2016
Contact name
Klaus Stensgaard Frederiksen
Organization name
Novo Nordisk A/S
Department
Molecular Genetics
Street address
Novo Nordisk Park F9.1.07
City
Måløv
ZIP/Postal code
DK-2760
Country
Denmark
Platform ID
GPL20766
Series (1)
GSE80119
Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice
Data table header descriptions
ID_REF
VALUE
Log2 RMA signal
Data table
ID_REF
VALUE
ENSMUSG00000000001_at
9.76862
ENSMUSG00000000003_at
3.45408
ENSMUSG00000000028_at
5.92494
ENSMUSG00000000031_at
4.37125
ENSMUSG00000000037_at
4.37803
ENSMUSG00000000049_at
5.28165
ENSMUSG00000000056_at
5.90823
ENSMUSG00000000058_at
7.11255
ENSMUSG00000000078_at
5.00505
ENSMUSG00000000085_at
5.99873
ENSMUSG00000000088_at
12.36289
ENSMUSG00000000093_at
4.41746
ENSMUSG00000000094_at
4.36768
ENSMUSG00000000103_at
4.60209
ENSMUSG00000000120_at
4.71302
ENSMUSG00000000125_at
3.35236
ENSMUSG00000000126_at
4.74363
ENSMUSG00000000127_at
4.48121
ENSMUSG00000000131_at
8.06647
ENSMUSG00000000134_at
7.87705
Total number of rows: 17204 Table truncated, full table size 503 Kbytes .Supplementary file
Size
Download
File type/resource
GSM2113016_12.CEL.gz
3.7 Mb
(ftp) (http)
CEL
Processed data included within Sample table