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Sample GSM2113017 Query DataSets for GSM2113017
Status Public on Jul 01, 2016
Title ko_exendin (6h)_13
Sample type RNA
Source name ko_exendin (6h)
Organism Mus musculus
Characteristics strain: CD-1
gender: male
genotype/variation: GLP1-R -/-
agent: exendin-4
time: 6h
tissue: Brunner’s glands
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label biotin
Label protocol Affymetrix in vitro transcription
Hybridization protocol Affymetrix EukGE-WS2v5
Scan protocol Affymetrix cel analysis
Data processing Bioconductor/R RMA
Submission date Apr 11, 2016
Last update date Jul 01, 2016
Contact name Klaus Stensgaard Frederiksen
Organization name Novo Nordisk A/S
Department Molecular Genetics
Street address Novo Nordisk Park F9.1.07
City Måløv
ZIP/Postal code DK-2760
Country Denmark
Platform ID GPL20766
Series (1)
GSE80119 Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice

Data table header descriptions
VALUE Log2 RMA signal

Data table
ENSMUSG00000000001_at 8.63584
ENSMUSG00000000003_at 4.12362
ENSMUSG00000000028_at 5.75596
ENSMUSG00000000031_at 4.78715
ENSMUSG00000000037_at 5.02494
ENSMUSG00000000049_at 5.82701
ENSMUSG00000000056_at 6.10552
ENSMUSG00000000058_at 7.19722
ENSMUSG00000000078_at 5.27151
ENSMUSG00000000085_at 6.47047
ENSMUSG00000000088_at 12.62609
ENSMUSG00000000093_at 4.71613
ENSMUSG00000000094_at 4.5305
ENSMUSG00000000103_at 3.99711
ENSMUSG00000000120_at 5.19607
ENSMUSG00000000125_at 3.215
ENSMUSG00000000126_at 4.87849
ENSMUSG00000000127_at 4.22633
ENSMUSG00000000131_at 7.51424
ENSMUSG00000000134_at 9.13714

Total number of rows: 17204

Table truncated, full table size 502 Kbytes.

Supplementary file Size Download File type/resource
GSM2113017_13.CEL.gz 3.7 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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