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Sample GSM2113020 Query DataSets for GSM2113020
Status Public on Jul 01, 2016
Title ko_exendin (18h)_16
Sample type RNA
 
Source name ko_exendin (18h)
Organism Mus musculus
Characteristics strain: CD-1
gender: male
genotype/variation: GLP1-R -/-
agent: exendin-4
time: 18h
tissue: Brunner’s glands
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label biotin
Label protocol Affymetrix in vitro transcription
 
Hybridization protocol Affymetrix EukGE-WS2v5
Scan protocol Affymetrix cel analysis
Data processing Bioconductor/R RMA
 
Submission date Apr 11, 2016
Last update date Jul 01, 2016
Contact name Klaus Stensgaard Frederiksen
Organization name Novo Nordisk A/S
Department Molecular Genetics
Street address Novo Nordisk Park F9.1.07
City Måløv
ZIP/Postal code DK-2760
Country Denmark
 
Platform ID GPL20766
Series (1)
GSE80119 Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
ENSMUSG00000000001_at 10.00027
ENSMUSG00000000003_at 3.45437
ENSMUSG00000000028_at 5.56357
ENSMUSG00000000031_at 4.294
ENSMUSG00000000037_at 4.38204
ENSMUSG00000000049_at 5.02942
ENSMUSG00000000056_at 6.00659
ENSMUSG00000000058_at 7.53465
ENSMUSG00000000078_at 5.32816
ENSMUSG00000000085_at 6.15702
ENSMUSG00000000088_at 12.2807
ENSMUSG00000000093_at 4.25093
ENSMUSG00000000094_at 4.1531
ENSMUSG00000000103_at 3.89713
ENSMUSG00000000120_at 4.83711
ENSMUSG00000000125_at 3.50109
ENSMUSG00000000126_at 4.50366
ENSMUSG00000000127_at 4.45613
ENSMUSG00000000131_at 7.76386
ENSMUSG00000000134_at 8.23203

Total number of rows: 17204

Table truncated, full table size 502 Kbytes.




Supplementary file Size Download File type/resource
GSM2113020_16.CEL.gz 3.5 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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