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Status
Public on Jul 01, 2016
Title
ko_exendin (18h)_17
Sample type
RNA
Source name
ko_exendin (18h)
Organism
Mus musculus
Characteristics
strain: CD-1 gender: male genotype/variation: GLP1-R -/- agent: exendin-4 time: 18h tissue: Brunner’s glands
Extracted molecule
total RNA
Extraction protocol
Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label
biotin
Label protocol
Affymetrix in vitro transcription
Hybridization protocol
Affymetrix EukGE-WS2v5
Scan protocol
Affymetrix cel analysis
Data processing
Bioconductor/R RMA
Submission date
Apr 11, 2016
Last update date
Jul 01, 2016
Contact name
Klaus Stensgaard Frederiksen
Organization name
Novo Nordisk A/S
Department
Molecular Genetics
Street address
Novo Nordisk Park F9.1.07
City
Måløv
ZIP/Postal code
DK-2760
Country
Denmark
Platform ID
GPL20766
Series (1)
GSE80119
Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice
Data table header descriptions
ID_REF
VALUE
Log2 RMA signal
Data table
ID_REF
VALUE
ENSMUSG00000000001_at
9.6495
ENSMUSG00000000003_at
3.51178
ENSMUSG00000000028_at
5.6851
ENSMUSG00000000031_at
4.26795
ENSMUSG00000000037_at
4.41537
ENSMUSG00000000049_at
5.31845
ENSMUSG00000000056_at
5.82989
ENSMUSG00000000058_at
7.24964
ENSMUSG00000000078_at
5.0411
ENSMUSG00000000085_at
6.10618
ENSMUSG00000000088_at
12.11878
ENSMUSG00000000093_at
4.68949
ENSMUSG00000000094_at
4.31333
ENSMUSG00000000103_at
4.35387
ENSMUSG00000000120_at
4.85004
ENSMUSG00000000125_at
3.37506
ENSMUSG00000000126_at
4.66503
ENSMUSG00000000127_at
4.4579
ENSMUSG00000000131_at
8.08847
ENSMUSG00000000134_at
8.23128
Total number of rows: 17204 Table truncated, full table size 502 Kbytes .Supplementary file
Size
Download
File type/resource
GSM2113021_17.CEL.gz
3.8 Mb
(ftp) (http)
CEL
Processed data included within Sample table