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Sample GSM2113023 Query DataSets for GSM2113023
Status Public on Jul 01, 2016
Title wt_untreated_19
Sample type RNA
 
Source name wt_untreated
Organism Mus musculus
Characteristics strain: CD-1
gender: male
genotype/variation: wild-type
agent: untreated
time: control
tissue: Brunner’s glands
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label biotin
Label protocol Affymetrix in vitro transcription
 
Hybridization protocol Affymetrix EukGE-WS2v5
Scan protocol Affymetrix cel analysis
Data processing Bioconductor/R RMA
 
Submission date Apr 11, 2016
Last update date Jul 01, 2016
Contact name Klaus Stensgaard Frederiksen
Organization name Novo Nordisk A/S
Department Molecular Genetics
Street address Novo Nordisk Park F9.1.07
City Måløv
ZIP/Postal code DK-2760
Country Denmark
 
Platform ID GPL20766
Series (1)
GSE80119 Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
ENSMUSG00000000001_at 10.03523
ENSMUSG00000000003_at 3.55993
ENSMUSG00000000028_at 5.61324
ENSMUSG00000000031_at 4.047
ENSMUSG00000000037_at 4.24323
ENSMUSG00000000049_at 4.99796
ENSMUSG00000000056_at 5.83322
ENSMUSG00000000058_at 6.85805
ENSMUSG00000000078_at 4.90945
ENSMUSG00000000085_at 6.30649
ENSMUSG00000000088_at 12.6005
ENSMUSG00000000093_at 4.75734
ENSMUSG00000000094_at 4.15919
ENSMUSG00000000103_at 5.11939
ENSMUSG00000000120_at 4.71536
ENSMUSG00000000125_at 3.2562
ENSMUSG00000000126_at 4.56154
ENSMUSG00000000127_at 4.44938
ENSMUSG00000000131_at 8.13985
ENSMUSG00000000134_at 8.08295

Total number of rows: 17204

Table truncated, full table size 503 Kbytes.




Supplementary file Size Download File type/resource
GSM2113023_19.CEL.gz 3.8 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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