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Sample GSM2113024 Query DataSets for GSM2113024
Status Public on Jul 01, 2016
Title wt_untreated_2
Sample type RNA
 
Source name wt_untreated
Organism Mus musculus
Characteristics strain: CD-1
gender: male
genotype/variation: wild-type
agent: untreated
time: control
tissue: Brunner’s glands
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label biotin
Label protocol Affymetrix in vitro transcription
 
Hybridization protocol Affymetrix EukGE-WS2v5
Scan protocol Affymetrix cel analysis
Data processing Bioconductor/R RMA
 
Submission date Apr 11, 2016
Last update date Jul 01, 2016
Contact name Klaus Stensgaard Frederiksen
Organization name Novo Nordisk A/S
Department Molecular Genetics
Street address Novo Nordisk Park F9.1.07
City Måløv
ZIP/Postal code DK-2760
Country Denmark
 
Platform ID GPL20766
Series (1)
GSE80119 Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
ENSMUSG00000000001_at 10.04271
ENSMUSG00000000003_at 3.54081
ENSMUSG00000000028_at 5.35967
ENSMUSG00000000031_at 4.26698
ENSMUSG00000000037_at 4.41033
ENSMUSG00000000049_at 5.22502
ENSMUSG00000000056_at 5.74278
ENSMUSG00000000058_at 7.10809
ENSMUSG00000000078_at 5.10074
ENSMUSG00000000085_at 6.08001
ENSMUSG00000000088_at 12.46001
ENSMUSG00000000093_at 4.62093
ENSMUSG00000000094_at 4.25069
ENSMUSG00000000103_at 4.58982
ENSMUSG00000000120_at 4.87131
ENSMUSG00000000125_at 3.19255
ENSMUSG00000000126_at 4.42073
ENSMUSG00000000127_at 4.7134
ENSMUSG00000000131_at 8.06109
ENSMUSG00000000134_at 7.82962

Total number of rows: 17204

Table truncated, full table size 502 Kbytes.




Supplementary file Size Download File type/resource
GSM2113024_2.CEL.gz 3.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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