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Sample GSM2113025 Query DataSets for GSM2113025
Status Public on Jul 01, 2016
Title ko_untreated_4
Sample type RNA
Source name ko_untreated
Organism Mus musculus
Characteristics strain: CD-1
gender: male
genotype/variation: GLP1-R -/-
agent: untreated
time: control
tissue: Brunner’s glands
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label biotin
Label protocol Affymetrix in vitro transcription
Hybridization protocol Affymetrix EukGE-WS2v5
Scan protocol Affymetrix cel analysis
Data processing Bioconductor/R RMA
Submission date Apr 11, 2016
Last update date Jul 01, 2016
Contact name Klaus Stensgaard Frederiksen
Organization name Novo Nordisk A/S
Department Molecular Genetics
Street address Novo Nordisk Park F9.1.07
City Måløv
ZIP/Postal code DK-2760
Country Denmark
Platform ID GPL20766
Series (1)
GSE80119 Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice

Data table header descriptions
VALUE Log2 RMA signal

Data table
ENSMUSG00000000001_at 9.71434
ENSMUSG00000000003_at 3.67489
ENSMUSG00000000028_at 5.20326
ENSMUSG00000000031_at 4.30469
ENSMUSG00000000037_at 4.28513
ENSMUSG00000000049_at 4.89218
ENSMUSG00000000056_at 5.72508
ENSMUSG00000000058_at 7.55836
ENSMUSG00000000078_at 5.9558
ENSMUSG00000000085_at 6.05507
ENSMUSG00000000088_at 12.38462
ENSMUSG00000000093_at 4.64918
ENSMUSG00000000094_at 4.4246
ENSMUSG00000000103_at 4.33303
ENSMUSG00000000120_at 4.79021
ENSMUSG00000000125_at 3.24995
ENSMUSG00000000126_at 4.68622
ENSMUSG00000000127_at 4.2534
ENSMUSG00000000131_at 7.86475
ENSMUSG00000000134_at 7.67954

Total number of rows: 17204

Table truncated, full table size 502 Kbytes.

Supplementary file Size Download File type/resource
GSM2113025_4.CEL.gz 3.7 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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